RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
CCDC144B-208ENST00000618081 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
CCDC144B-208ENST00000618081 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
CCDC144B-208ENST00000618081 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
CCDC144B-208ENST00000618081 MT1AP04731 61 aa3.19□□□□□ -1.9
CCDC144B-208ENST00000618081 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
CCDC144B-208ENST00000618081 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
CCDC144B-208ENST00000618081 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
CCDC144B-208ENST00000618081 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
CCDC144B-208ENST00000618081 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
CCDC144B-208ENST00000618081 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.9
CCDC144B-208ENST00000618081 HERC2O95714 4834 aa3.12□□□□□ -1.91
CCDC144B-208ENST00000618081 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
CCDC144B-208ENST00000618081 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
CCDC144B-208ENST00000618081 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
CCDC144B-208ENST00000618081 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
CCDC144B-208ENST00000618081 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
CCDC144B-208ENST00000618081 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
CCDC144B-208ENST00000618081 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
CCDC144B-208ENST00000618081 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
CCDC144B-208ENST00000618081 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
CCDC144B-208ENST00000618081 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
CCDC144B-208ENST00000618081 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
CCDC144B-208ENST00000618081 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
CCDC144B-208ENST00000618081 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
CCDC144B-208ENST00000618081 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
CCDC144B-208ENST00000618081 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
CCDC144B-208ENST00000618081 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CCDC144B-208ENST00000618081 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
CCDC144B-208ENST00000618081 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
CCDC144B-208ENST00000618081 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
CCDC144B-208ENST00000618081 HERC1Q15751 4861 aa2.88□□□□□ -1.95
CCDC144B-208ENST00000618081 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
CCDC144B-208ENST00000618081 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
CCDC144B-208ENST00000618081 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
CCDC144B-208ENST00000618081 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
CCDC144B-208ENST00000618081 MUC2Q02817 5179 aa2.72□□□□□ -1.97
CCDC144B-208ENST00000618081 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
CCDC144B-208ENST00000618081 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
CCDC144B-208ENST00000618081 USH2AO75445 5202 aa2.5□□□□□ -2.01
CCDC144B-208ENST00000618081 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
CCDC144B-208ENST00000618081 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
CCDC144B-208ENST00000618081 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
CCDC144B-208ENST00000618081 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
CCDC144B-208ENST00000618081 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
CCDC144B-208ENST00000618081 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
CCDC144B-208ENST00000618081 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
CCDC144B-208ENST00000618081 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
CCDC144B-208ENST00000618081 NEBP20929 6669 aa2.26□□□□□ -2.05
CCDC144B-208ENST00000618081 KMT2DO14686 5537 aa2.26□□□□□ -2.05
CCDC144B-208ENST00000618081 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
CCDC144B-208ENST00000618081 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
CCDC144B-208ENST00000618081 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
CCDC144B-208ENST00000618081 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
CCDC144B-208ENST00000618081 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
CCDC144B-208ENST00000618081 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
CCDC144B-208ENST00000618081 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
CCDC144B-208ENST00000618081 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
CCDC144B-208ENST00000618081 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
CCDC144B-208ENST00000618081 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
CCDC144B-208ENST00000618081 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CCDC144B-208ENST00000618081 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CCDC144B-208ENST00000618081 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
CCDC144B-208ENST00000618081 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
CCDC144B-208ENST00000618081 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
CCDC144B-208ENST00000618081 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
CCDC144B-208ENST00000618081 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
CCDC144B-208ENST00000618081 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CCDC144B-208ENST00000618081 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
CCDC144B-208ENST00000618081 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
CCDC144B-208ENST00000618081 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CCDC144B-208ENST00000618081 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CCDC144B-208ENST00000618081 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
CCDC144B-208ENST00000618081 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
CCDC144B-208ENST00000618081 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CCDC144B-208ENST00000618081 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
CCDC144B-208ENST00000618081 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 73.2 ms