RNA–Protein interactions for RNA: ENST00000617164.4

BARD1-212, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-212ENST00000617164 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
BARD1-212ENST00000617164 MT1MQ8N339 61 aa3.97□□□□□ -1.77
BARD1-212ENST00000617164 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
BARD1-212ENST00000617164 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
BARD1-212ENST00000617164 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
BARD1-212ENST00000617164 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
BARD1-212ENST00000617164 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
BARD1-212ENST00000617164 MT4P47944 62 aa3.81□□□□□ -1.8
BARD1-212ENST00000617164 MT3P25713 68 aa3.78□□□□□ -1.8
BARD1-212ENST00000617164 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
BARD1-212ENST00000617164 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
BARD1-212ENST00000617164 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
BARD1-212ENST00000617164 MUC2Q02817 5179 aa3.75□□□□□ -1.81
BARD1-212ENST00000617164 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
BARD1-212ENST00000617164 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
BARD1-212ENST00000617164 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
BARD1-212ENST00000617164 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
BARD1-212ENST00000617164 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
BARD1-212ENST00000617164 MT1AP04731 61 aa3.66□□□□□ -1.82
BARD1-212ENST00000617164 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
BARD1-212ENST00000617164 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
BARD1-212ENST00000617164 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
BARD1-212ENST00000617164 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
BARD1-212ENST00000617164 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
BARD1-212ENST00000617164 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
BARD1-212ENST00000617164 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
BARD1-212ENST00000617164 PRM1P04553 51 aa3.52□□□□□ -1.85
BARD1-212ENST00000617164 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
BARD1-212ENST00000617164 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
BARD1-212ENST00000617164 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
BARD1-212ENST00000617164 USH2AO75445 5202 aa3.41□□□□□ -1.86
BARD1-212ENST00000617164 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
BARD1-212ENST00000617164 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
BARD1-212ENST00000617164 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
BARD1-212ENST00000617164 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
BARD1-212ENST00000617164 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
BARD1-212ENST00000617164 KMT2DO14686 5537 aa3.29□□□□□ -1.88
BARD1-212ENST00000617164 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
BARD1-212ENST00000617164 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.89
BARD1-212ENST00000617164 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
BARD1-212ENST00000617164 NEBP20929 6669 aa3.17□□□□□ -1.9
BARD1-212ENST00000617164 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
BARD1-212ENST00000617164 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
BARD1-212ENST00000617164 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
BARD1-212ENST00000617164 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
BARD1-212ENST00000617164 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
BARD1-212ENST00000617164 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
BARD1-212ENST00000617164 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
BARD1-212ENST00000617164 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
BARD1-212ENST00000617164 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
BARD1-212ENST00000617164 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
BARD1-212ENST00000617164 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
BARD1-212ENST00000617164 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
BARD1-212ENST00000617164 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
BARD1-212ENST00000617164 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
BARD1-212ENST00000617164 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
BARD1-212ENST00000617164 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
BARD1-212ENST00000617164 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
BARD1-212ENST00000617164 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
BARD1-212ENST00000617164 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
BARD1-212ENST00000617164 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
BARD1-212ENST00000617164 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
BARD1-212ENST00000617164 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
BARD1-212ENST00000617164 MUC5ACP98088 5654 aa2.28□□□□□ -2.05
BARD1-212ENST00000617164 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
BARD1-212ENST00000617164 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
BARD1-212ENST00000617164 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.09
BARD1-212ENST00000617164 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
BARD1-212ENST00000617164 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
BARD1-212ENST00000617164 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
BARD1-212ENST00000617164 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
BARD1-212ENST00000617164 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
BARD1-212ENST00000617164 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
BARD1-212ENST00000617164 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
BARD1-212ENST00000617164 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
BARD1-212ENST00000617164 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
BARD1-212ENST00000617164 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 28.2 ms