RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.86
TPT1-214ENST00000616577 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
TPT1-214ENST00000616577 SPRR2DP22532 72 aa3.35□□□□□ -1.87
TPT1-214ENST00000616577 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
TPT1-214ENST00000616577 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
TPT1-214ENST00000616577 MT3P25713 68 aa3.3□□□□□ -1.88
TPT1-214ENST00000616577 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
TPT1-214ENST00000616577 MT1MQ8N339 61 aa3.28□□□□□ -1.88
TPT1-214ENST00000616577 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
TPT1-214ENST00000616577 USH2AO75445 5202 aa3.25□□□□□ -1.89
TPT1-214ENST00000616577 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
TPT1-214ENST00000616577 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
TPT1-214ENST00000616577 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
TPT1-214ENST00000616577 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
TPT1-214ENST00000616577 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
TPT1-214ENST00000616577 LCE2DQ5TA82 110 aaPredicted RBP3.17□□□□□ -1.9
TPT1-214ENST00000616577 PRM1P04553 51 aa3.15□□□□□ -1.91
TPT1-214ENST00000616577 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
TPT1-214ENST00000616577 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
TPT1-214ENST00000616577 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
TPT1-214ENST00000616577 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
TPT1-214ENST00000616577 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
TPT1-214ENST00000616577 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
TPT1-214ENST00000616577 KMT2DO14686 5537 aa3.08□□□□□ -1.92
TPT1-214ENST00000616577 MT4P47944 62 aa3.03□□□□□ -1.92
TPT1-214ENST00000616577 MT1AP04731 61 aa3.02□□□□□ -1.93
TPT1-214ENST00000616577 KRTAP9-6A0A140TA67 174 aa2.98□□□□□ -1.93
TPT1-214ENST00000616577 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
TPT1-214ENST00000616577 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
TPT1-214ENST00000616577 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
TPT1-214ENST00000616577 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
TPT1-214ENST00000616577 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
TPT1-214ENST00000616577 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
TPT1-214ENST00000616577 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
TPT1-214ENST00000616577 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
TPT1-214ENST00000616577 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
TPT1-214ENST00000616577 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
TPT1-214ENST00000616577 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
TPT1-214ENST00000616577 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
TPT1-214ENST00000616577 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
TPT1-214ENST00000616577 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
TPT1-214ENST00000616577 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
TPT1-214ENST00000616577 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
TPT1-214ENST00000616577 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
TPT1-214ENST00000616577 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TPT1-214ENST00000616577 NEBP20929 6669 aa2.51□□□□□ -2.01
TPT1-214ENST00000616577 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
TPT1-214ENST00000616577 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
TPT1-214ENST00000616577 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
TPT1-214ENST00000616577 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
TPT1-214ENST00000616577 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
TPT1-214ENST00000616577 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
TPT1-214ENST00000616577 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
TPT1-214ENST00000616577 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
TPT1-214ENST00000616577 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TPT1-214ENST00000616577 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
TPT1-214ENST00000616577 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
TPT1-214ENST00000616577 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
TPT1-214ENST00000616577 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
TPT1-214ENST00000616577 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
TPT1-214ENST00000616577 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
TPT1-214ENST00000616577 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
TPT1-214ENST00000616577 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
TPT1-214ENST00000616577 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
TPT1-214ENST00000616577 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
TPT1-214ENST00000616577 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
TPT1-214ENST00000616577 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
TPT1-214ENST00000616577 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
TPT1-214ENST00000616577 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
TPT1-214ENST00000616577 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
TPT1-214ENST00000616577 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
TPT1-214ENST00000616577 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
TPT1-214ENST00000616577 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
TPT1-214ENST00000616577 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
TPT1-214ENST00000616577 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
TPT1-214ENST00000616577 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
TPT1-214ENST00000616577 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 122.2 ms