RNA–Protein interactions for RNA: ENST00000616317.4

ACACA-237, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best) BASIC

Gene ACACA, Length 9,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-237ENST00000616317 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
ACACA-237ENST00000616317 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
ACACA-237ENST00000616317 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
ACACA-237ENST00000616317 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
ACACA-237ENST00000616317 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
ACACA-237ENST00000616317 LRP2P98164 4655 aa3.3□□□□□ -1.88
ACACA-237ENST00000616317 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
ACACA-237ENST00000616317 HERC2O95714 4834 aa3.27□□□□□ -1.89
ACACA-237ENST00000616317 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
ACACA-237ENST00000616317 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
ACACA-237ENST00000616317 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
ACACA-237ENST00000616317 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
ACACA-237ENST00000616317 PCLOQ9Y6V0 5065 aa3.26□□□□□ -1.89
ACACA-237ENST00000616317 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
ACACA-237ENST00000616317 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
ACACA-237ENST00000616317 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
ACACA-237ENST00000616317 RYR2Q92736 4967 aa3.23□□□□□ -1.89
ACACA-237ENST00000616317 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
ACACA-237ENST00000616317 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
ACACA-237ENST00000616317 LPAP08519 4548 aa3.16□□□□□ -1.9
ACACA-237ENST00000616317 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
ACACA-237ENST00000616317 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
ACACA-237ENST00000616317 BIRC6Q9NR09 4857 aa3.08□□□□□ -1.92
ACACA-237ENST00000616317 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
ACACA-237ENST00000616317 HERC1Q15751 4861 aa3.05□□□□□ -1.92
ACACA-237ENST00000616317 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
ACACA-237ENST00000616317 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
ACACA-237ENST00000616317 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.93
ACACA-237ENST00000616317 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
ACACA-237ENST00000616317 KIAA1109Q2LD37 5005 aa2.89□□□□□ -1.95
ACACA-237ENST00000616317 EPPK1P58107 5090 aaKnown RBP2.86□□□□□ -1.95
ACACA-237ENST00000616317 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
ACACA-237ENST00000616317 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
ACACA-237ENST00000616317 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
ACACA-237ENST00000616317 RNF213Q63HN8 5207 aa2.69□□□□□ -1.98
ACACA-237ENST00000616317 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
ACACA-237ENST00000616317 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
ACACA-237ENST00000616317 MUC2Q02817 5179 aa2.6□□□□□ -1.99
ACACA-237ENST00000616317 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -2
ACACA-237ENST00000616317 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
ACACA-237ENST00000616317 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
ACACA-237ENST00000616317 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
ACACA-237ENST00000616317 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
ACACA-237ENST00000616317 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
ACACA-237ENST00000616317 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
ACACA-237ENST00000616317 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
ACACA-237ENST00000616317 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
ACACA-237ENST00000616317 NEBP20929 6669 aa2.35□□□□□ -2.03
ACACA-237ENST00000616317 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
ACACA-237ENST00000616317 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
ACACA-237ENST00000616317 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
ACACA-237ENST00000616317 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
ACACA-237ENST00000616317 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
ACACA-237ENST00000616317 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
ACACA-237ENST00000616317 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
ACACA-237ENST00000616317 USH2AO75445 5202 aa2.14□□□□□ -2.07
ACACA-237ENST00000616317 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
ACACA-237ENST00000616317 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
ACACA-237ENST00000616317 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
ACACA-237ENST00000616317 KMT2DO14686 5537 aa2.07□□□□□ -2.08
ACACA-237ENST00000616317 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
ACACA-237ENST00000616317 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
ACACA-237ENST00000616317 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
ACACA-237ENST00000616317 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
ACACA-237ENST00000616317 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
ACACA-237ENST00000616317 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
ACACA-237ENST00000616317 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
ACACA-237ENST00000616317 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
ACACA-237ENST00000616317 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
ACACA-237ENST00000616317 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ACACA-237ENST00000616317 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.14
ACACA-237ENST00000616317 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
ACACA-237ENST00000616317 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
ACACA-237ENST00000616317 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
ACACA-237ENST00000616317 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
ACACA-237ENST00000616317 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
ACACA-237ENST00000616317 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 58.7 ms