RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
GABPB1-212ENST00000615671 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
GABPB1-212ENST00000615671 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
GABPB1-212ENST00000615671 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
GABPB1-212ENST00000615671 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
GABPB1-212ENST00000615671 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
GABPB1-212ENST00000615671 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
GABPB1-212ENST00000615671 FLGP20930 4061 aaPredicted RBP5.57□□□□□ -1.52
GABPB1-212ENST00000615671 KMT2CQ8NEZ4 4911 aaKnown RBP5.54□□□□□ -1.52
GABPB1-212ENST00000615671 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
GABPB1-212ENST00000615671 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
GABPB1-212ENST00000615671 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
GABPB1-212ENST00000615671 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
GABPB1-212ENST00000615671 MT1AP04731 61 aa5.29□□□□□ -1.56
GABPB1-212ENST00000615671 FSIP2Q5CZC0 6907 aa5.27□□□□□ -1.57
GABPB1-212ENST00000615671 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
GABPB1-212ENST00000615671 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
GABPB1-212ENST00000615671 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
GABPB1-212ENST00000615671 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
GABPB1-212ENST00000615671 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
GABPB1-212ENST00000615671 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
GABPB1-212ENST00000615671 LCE1FQ5T754 118 aa5.23□□□□□ -1.57
GABPB1-212ENST00000615671 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
GABPB1-212ENST00000615671 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
GABPB1-212ENST00000615671 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
GABPB1-212ENST00000615671 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
GABPB1-212ENST00000615671 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
GABPB1-212ENST00000615671 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
GABPB1-212ENST00000615671 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
GABPB1-212ENST00000615671 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-212ENST00000615671 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
GABPB1-212ENST00000615671 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
GABPB1-212ENST00000615671 MUC2Q02817 5179 aa4.93□□□□□ -1.62
GABPB1-212ENST00000615671 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
GABPB1-212ENST00000615671 KRTAP2-2Q9BYT5 123 aa4.9□□□□□ -1.62
GABPB1-212ENST00000615671 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
GABPB1-212ENST00000615671 UBR4Q5T4S7 5183 aa4.84□□□□□ -1.63
GABPB1-212ENST00000615671 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
GABPB1-212ENST00000615671 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
GABPB1-212ENST00000615671 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
GABPB1-212ENST00000615671 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
GABPB1-212ENST00000615671 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
GABPB1-212ENST00000615671 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
GABPB1-212ENST00000615671 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
GABPB1-212ENST00000615671 KMT2DO14686 5537 aa4.26□□□□□ -1.73
GABPB1-212ENST00000615671 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
GABPB1-212ENST00000615671 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
GABPB1-212ENST00000615671 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
GABPB1-212ENST00000615671 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
GABPB1-212ENST00000615671 USH2AO75445 5202 aa4.16□□□□□ -1.74
GABPB1-212ENST00000615671 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
GABPB1-212ENST00000615671 NEBP20929 6669 aa4.13□□□□□ -1.75
GABPB1-212ENST00000615671 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
GABPB1-212ENST00000615671 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
GABPB1-212ENST00000615671 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
GABPB1-212ENST00000615671 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
GABPB1-212ENST00000615671 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-212ENST00000615671 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
GABPB1-212ENST00000615671 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
GABPB1-212ENST00000615671 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
GABPB1-212ENST00000615671 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
GABPB1-212ENST00000615671 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
GABPB1-212ENST00000615671 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
GABPB1-212ENST00000615671 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
GABPB1-212ENST00000615671 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
GABPB1-212ENST00000615671 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
GABPB1-212ENST00000615671 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
GABPB1-212ENST00000615671 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
GABPB1-212ENST00000615671 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
GABPB1-212ENST00000615671 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
GABPB1-212ENST00000615671 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
GABPB1-212ENST00000615671 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
GABPB1-212ENST00000615671 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
GABPB1-212ENST00000615671 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
GABPB1-212ENST00000615671 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
GABPB1-212ENST00000615671 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
GABPB1-212ENST00000615671 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
GABPB1-212ENST00000615671 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 118.3 ms