RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
CHD1-212ENST00000614616 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
CHD1-212ENST00000614616 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
CHD1-212ENST00000614616 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
CHD1-212ENST00000614616 HYDINQ4G0P3 5121 aa3.64□□□□□ -1.83
CHD1-212ENST00000614616 RYR3Q15413 4870 aa3.64□□□□□ -1.83
CHD1-212ENST00000614616 MT4P47944 62 aa3.64□□□□□ -1.83
CHD1-212ENST00000614616 HERC1Q15751 4861 aa3.64□□□□□ -1.83
CHD1-212ENST00000614616 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
CHD1-212ENST00000614616 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
CHD1-212ENST00000614616 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
CHD1-212ENST00000614616 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
CHD1-212ENST00000614616 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
CHD1-212ENST00000614616 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
CHD1-212ENST00000614616 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
CHD1-212ENST00000614616 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CHD1-212ENST00000614616 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
CHD1-212ENST00000614616 RYR2Q92736 4967 aa3.46□□□□□ -1.86
CHD1-212ENST00000614616 HERC2O95714 4834 aa3.43□□□□□ -1.86
CHD1-212ENST00000614616 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
CHD1-212ENST00000614616 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
CHD1-212ENST00000614616 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
CHD1-212ENST00000614616 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
CHD1-212ENST00000614616 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
CHD1-212ENST00000614616 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
CHD1-212ENST00000614616 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
CHD1-212ENST00000614616 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
CHD1-212ENST00000614616 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
CHD1-212ENST00000614616 MUC2Q02817 5179 aa3.16□□□□□ -1.9
CHD1-212ENST00000614616 LCE4AQ5TA78 99 aa3.15□□□□□ -1.9
CHD1-212ENST00000614616 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
CHD1-212ENST00000614616 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
CHD1-212ENST00000614616 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CHD1-212ENST00000614616 UBR4Q5T4S7 5183 aa3.09□□□□□ -1.92
CHD1-212ENST00000614616 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.92
CHD1-212ENST00000614616 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
CHD1-212ENST00000614616 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
CHD1-212ENST00000614616 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
CHD1-212ENST00000614616 KMT2DO14686 5537 aa2.92□□□□□ -1.94
CHD1-212ENST00000614616 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
CHD1-212ENST00000614616 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.96
CHD1-212ENST00000614616 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
CHD1-212ENST00000614616 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
CHD1-212ENST00000614616 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.66□□□□□ -1.98
CHD1-212ENST00000614616 USH2AO75445 5202 aa2.64□□□□□ -1.99
CHD1-212ENST00000614616 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CHD1-212ENST00000614616 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
CHD1-212ENST00000614616 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CHD1-212ENST00000614616 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
CHD1-212ENST00000614616 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
CHD1-212ENST00000614616 KRTAP5-9P26371 169 aa2.55□□□□□ -2
CHD1-212ENST00000614616 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
CHD1-212ENST00000614616 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
CHD1-212ENST00000614616 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
CHD1-212ENST00000614616 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
CHD1-212ENST00000614616 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
CHD1-212ENST00000614616 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
CHD1-212ENST00000614616 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
CHD1-212ENST00000614616 NEBP20929 6669 aa2.32□□□□□ -2.04
CHD1-212ENST00000614616 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
CHD1-212ENST00000614616 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
CHD1-212ENST00000614616 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
CHD1-212ENST00000614616 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CHD1-212ENST00000614616 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CHD1-212ENST00000614616 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CHD1-212ENST00000614616 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
CHD1-212ENST00000614616 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
CHD1-212ENST00000614616 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
CHD1-212ENST00000614616 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
CHD1-212ENST00000614616 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
CHD1-212ENST00000614616 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
CHD1-212ENST00000614616 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
CHD1-212ENST00000614616 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CHD1-212ENST00000614616 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
CHD1-212ENST00000614616 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
CHD1-212ENST00000614616 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
CHD1-212ENST00000614616 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 61.4 ms