RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
ALMS1-207ENST00000614410 LCE1AQ5T7P2 110 aa2.05□□□□□ -2.08
ALMS1-207ENST00000614410 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
ALMS1-207ENST00000614410 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
ALMS1-207ENST00000614410 KRTAP9-2Q9BYQ4 174 aa2.01□□□□□ -2.09
ALMS1-207ENST00000614410 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
ALMS1-207ENST00000614410 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
ALMS1-207ENST00000614410 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
ALMS1-207ENST00000614410 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
ALMS1-207ENST00000614410 LCE4AQ5TA78 99 aa1.97□□□□□ -2.09
ALMS1-207ENST00000614410 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
ALMS1-207ENST00000614410 KMT2CQ8NEZ4 4911 aaKnown RBP1.96□□□□□ -2.1
ALMS1-207ENST00000614410 HYDINQ4G0P3 5121 aa1.95□□□□□ -2.1
ALMS1-207ENST00000614410 RYR3Q15413 4870 aa1.95□□□□□ -2.1
ALMS1-207ENST00000614410 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
ALMS1-207ENST00000614410 HERC2O95714 4834 aa1.89□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP9-7A8MTY7 169 aa1.89□□□□□ -2.11
ALMS1-207ENST00000614410 MT1AP04731 61 aa1.89□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP9-6A0A140TA67 174 aa1.84□□□□□ -2.11
ALMS1-207ENST00000614410 KRTAP9-4Q9BYQ2 154 aa1.83□□□□□ -2.12
ALMS1-207ENST00000614410 KRTAP9-6A8MVA2 160 aa1.79□□□□□ -2.12
ALMS1-207ENST00000614410 KRTAP2-2Q9BYT5 123 aa1.79□□□□□ -2.12
ALMS1-207ENST00000614410 KRTAP4-11Q9BYQ6 195 aa1.79□□□□□ -2.12
ALMS1-207ENST00000614410 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.12
ALMS1-207ENST00000614410 HERC1Q15751 4861 aa1.75□□□□□ -2.13
ALMS1-207ENST00000614410 LCE2AQ5TA79 106 aaPredicted RBP1.74□□□□□ -2.13
ALMS1-207ENST00000614410 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
ALMS1-207ENST00000614410 KMT2DO14686 5537 aa1.72□□□□□ -2.13
ALMS1-207ENST00000614410 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
ALMS1-207ENST00000614410 RYR2Q92736 4967 aa1.7□□□□□ -2.14
ALMS1-207ENST00000614410 KRTAP9-9Q9BYP9 154 aa1.7□□□□□ -2.14
ALMS1-207ENST00000614410 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
ALMS1-207ENST00000614410 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
ALMS1-207ENST00000614410 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.65□□□□□ -2.15
ALMS1-207ENST00000614410 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
ALMS1-207ENST00000614410 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
ALMS1-207ENST00000614410 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
ALMS1-207ENST00000614410 MUC2Q02817 5179 aa1.61□□□□□ -2.15
ALMS1-207ENST00000614410 KRTAP4-12Q9BQ66 201 aa1.59□□□□□ -2.16
ALMS1-207ENST00000614410 KRTAP4-2Q9BYR5 136 aa1.59□□□□□ -2.16
ALMS1-207ENST00000614410 KIAA1109Q2LD37 5005 aa1.53□□□□□ -2.16
ALMS1-207ENST00000614410 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
ALMS1-207ENST00000614410 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
ALMS1-207ENST00000614410 ABCA13Q86UQ4 5058 aa1.45□□□□□ -2.18
ALMS1-207ENST00000614410 EPPK1P58107 5090 aaKnown RBP1.43□□□□□ -2.18
ALMS1-207ENST00000614410 PCLOQ9Y6V0 5065 aa1.41□□□□□ -2.18
ALMS1-207ENST00000614410 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
ALMS1-207ENST00000614410 SSPOA2VEC9 5147 aa1.34□□□□□ -2.2
ALMS1-207ENST00000614410 NEBP20929 6669 aa1.33□□□□□ -2.2
ALMS1-207ENST00000614410 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
ALMS1-207ENST00000614410 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
ALMS1-207ENST00000614410 KRTAP5-9P26371 169 aa1.26□□□□□ -2.21
ALMS1-207ENST00000614410 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
ALMS1-207ENST00000614410 KRTAP5-4Q6L8H1 288 aa1.22□□□□□ -2.21
ALMS1-207ENST00000614410 USH2AO75445 5202 aa1.18□□□□□ -2.22
ALMS1-207ENST00000614410 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
ALMS1-207ENST00000614410 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
ALMS1-207ENST00000614410 KRTAP5-3Q6L8H2 238 aa1.1□□□□□ -2.23
ALMS1-207ENST00000614410 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.23
ALMS1-207ENST00000614410 KRTAP5-8O75690 187 aa1.05□□□□□ -2.24
ALMS1-207ENST00000614410 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
ALMS1-207ENST00000614410 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
ALMS1-207ENST00000614410 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
ALMS1-207ENST00000614410 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
ALMS1-207ENST00000614410 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
ALMS1-207ENST00000614410 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
ALMS1-207ENST00000614410 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
ALMS1-207ENST00000614410 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
ALMS1-207ENST00000614410 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.81□□□□□ -2.28
ALMS1-207ENST00000614410 KRTAP5-11Q6L8G4 156 aa0.81□□□□□ -2.28
ALMS1-207ENST00000614410 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
ALMS1-207ENST00000614410 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
ALMS1-207ENST00000614410 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 120.8 ms