RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
CLCN3-211ENST00000613795 MT1MQ8N339 61 aa2.11□□□□□ -2.07
CLCN3-211ENST00000613795 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
CLCN3-211ENST00000613795 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.07
CLCN3-211ENST00000613795 HERC2O95714 4834 aa2.09□□□□□ -2.08
CLCN3-211ENST00000613795 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
CLCN3-211ENST00000613795 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
CLCN3-211ENST00000613795 TNXBP22105 4242 aa2.06□□□□□ -2.08
CLCN3-211ENST00000613795 LRP2P98164 4655 aa2.04□□□□□ -2.08
CLCN3-211ENST00000613795 MT1AP04731 61 aa2.02□□□□□ -2.09
CLCN3-211ENST00000613795 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
CLCN3-211ENST00000613795 HYDINQ4G0P3 5121 aa2.02□□□□□ -2.09
CLCN3-211ENST00000613795 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
CLCN3-211ENST00000613795 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
CLCN3-211ENST00000613795 KMT2CQ8NEZ4 4911 aaKnown RBP1.99□□□□□ -2.09
CLCN3-211ENST00000613795 ABCA13Q86UQ4 5058 aa1.98□□□□□ -2.09
CLCN3-211ENST00000613795 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.96□□□□□ -2.1
CLCN3-211ENST00000613795 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
CLCN3-211ENST00000613795 MT4P47944 62 aa1.95□□□□□ -2.1
CLCN3-211ENST00000613795 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
CLCN3-211ENST00000613795 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
CLCN3-211ENST00000613795 LPAP08519 4548 aa1.91□□□□□ -2.1
CLCN3-211ENST00000613795 KRTAP2-2Q9BYT5 123 aa1.9□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CLCN3-211ENST00000613795 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
CLCN3-211ENST00000613795 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
CLCN3-211ENST00000613795 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
CLCN3-211ENST00000613795 KRTAP9-9Q9BYP9 154 aa1.83□□□□□ -2.12
CLCN3-211ENST00000613795 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
CLCN3-211ENST00000613795 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
CLCN3-211ENST00000613795 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
CLCN3-211ENST00000613795 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
CLCN3-211ENST00000613795 RNF213Q63HN8 5207 aa1.78□□□□□ -2.12
CLCN3-211ENST00000613795 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
CLCN3-211ENST00000613795 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
CLCN3-211ENST00000613795 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
CLCN3-211ENST00000613795 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
CLCN3-211ENST00000613795 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
CLCN3-211ENST00000613795 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
CLCN3-211ENST00000613795 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
CLCN3-211ENST00000613795 USH2AO75445 5202 aa1.62□□□□□ -2.15
CLCN3-211ENST00000613795 OBSCNQ5VST9 7968 aa1.6□□□□□ -2.15
CLCN3-211ENST00000613795 FSIP2Q5CZC0 6907 aa1.56□□□□□ -2.16
CLCN3-211ENST00000613795 NEBP20929 6669 aa1.56□□□□□ -2.16
CLCN3-211ENST00000613795 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
CLCN3-211ENST00000613795 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
CLCN3-211ENST00000613795 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
CLCN3-211ENST00000613795 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
CLCN3-211ENST00000613795 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
CLCN3-211ENST00000613795 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
CLCN3-211ENST00000613795 MUC2Q02817 5179 aa1.44□□□□□ -2.18
CLCN3-211ENST00000613795 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
CLCN3-211ENST00000613795 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
CLCN3-211ENST00000613795 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
CLCN3-211ENST00000613795 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
CLCN3-211ENST00000613795 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
CLCN3-211ENST00000613795 KMT2DO14686 5537 aa1.32□□□□□ -2.2
CLCN3-211ENST00000613795 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
CLCN3-211ENST00000613795 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
CLCN3-211ENST00000613795 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
CLCN3-211ENST00000613795 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
CLCN3-211ENST00000613795 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
CLCN3-211ENST00000613795 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
CLCN3-211ENST00000613795 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
CLCN3-211ENST00000613795 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CLCN3-211ENST00000613795 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
CLCN3-211ENST00000613795 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
CLCN3-211ENST00000613795 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CLCN3-211ENST00000613795 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
CLCN3-211ENST00000613795 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CLCN3-211ENST00000613795 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
CLCN3-211ENST00000613795 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
CLCN3-211ENST00000613795 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 128.1 ms