RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
FGFR3-210ENST00000613647 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
FGFR3-210ENST00000613647 SPRR2DP22532 72 aa6.42□□□□□ -1.38
FGFR3-210ENST00000613647 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.4
FGFR3-210ENST00000613647 OBSCNQ5VST9 7968 aa6.31□□□□□ -1.4
FGFR3-210ENST00000613647 MT1MQ8N339 61 aa6.3□□□□□ -1.4
FGFR3-210ENST00000613647 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
FGFR3-210ENST00000613647 LCE3DQ9BYE3 92 aa6.24□□□□□ -1.41
FGFR3-210ENST00000613647 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
FGFR3-210ENST00000613647 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
FGFR3-210ENST00000613647 LCE3EQ5T5B0 92 aa6.12□□□□□ -1.43
FGFR3-210ENST00000613647 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
FGFR3-210ENST00000613647 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
FGFR3-210ENST00000613647 USH2AO75445 5202 aa6.06□□□□□ -1.44
FGFR3-210ENST00000613647 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
FGFR3-210ENST00000613647 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
FGFR3-210ENST00000613647 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
FGFR3-210ENST00000613647 KMT2DO14686 5537 aa5.89□□□□□ -1.47
FGFR3-210ENST00000613647 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
FGFR3-210ENST00000613647 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
FGFR3-210ENST00000613647 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
FGFR3-210ENST00000613647 MT3P25713 68 aa5.84□□□□□ -1.47
FGFR3-210ENST00000613647 MT4P47944 62 aa5.77□□□□□ -1.49
FGFR3-210ENST00000613647 MT1AP04731 61 aa5.77□□□□□ -1.49
FGFR3-210ENST00000613647 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
FGFR3-210ENST00000613647 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
FGFR3-210ENST00000613647 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
FGFR3-210ENST00000613647 PRM1P04553 51 aa5.64□□□□□ -1.51
FGFR3-210ENST00000613647 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
FGFR3-210ENST00000613647 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
FGFR3-210ENST00000613647 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
FGFR3-210ENST00000613647 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
FGFR3-210ENST00000613647 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
FGFR3-210ENST00000613647 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
FGFR3-210ENST00000613647 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
FGFR3-210ENST00000613647 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
FGFR3-210ENST00000613647 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
FGFR3-210ENST00000613647 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
FGFR3-210ENST00000613647 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
FGFR3-210ENST00000613647 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
FGFR3-210ENST00000613647 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
FGFR3-210ENST00000613647 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
FGFR3-210ENST00000613647 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
FGFR3-210ENST00000613647 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
FGFR3-210ENST00000613647 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.61
FGFR3-210ENST00000613647 NEBP20929 6669 aa4.82□□□□□ -1.64
FGFR3-210ENST00000613647 MUC19Q7Z5P9 8384 aa4.79□□□□□ -1.64
FGFR3-210ENST00000613647 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
FGFR3-210ENST00000613647 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
FGFR3-210ENST00000613647 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
FGFR3-210ENST00000613647 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
FGFR3-210ENST00000613647 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
FGFR3-210ENST00000613647 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
FGFR3-210ENST00000613647 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
FGFR3-210ENST00000613647 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
FGFR3-210ENST00000613647 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
FGFR3-210ENST00000613647 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
FGFR3-210ENST00000613647 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.74
FGFR3-210ENST00000613647 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
FGFR3-210ENST00000613647 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
FGFR3-210ENST00000613647 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
FGFR3-210ENST00000613647 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
FGFR3-210ENST00000613647 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
FGFR3-210ENST00000613647 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
FGFR3-210ENST00000613647 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
FGFR3-210ENST00000613647 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
FGFR3-210ENST00000613647 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
FGFR3-210ENST00000613647 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
FGFR3-210ENST00000613647 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
FGFR3-210ENST00000613647 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
FGFR3-210ENST00000613647 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
FGFR3-210ENST00000613647 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
FGFR3-210ENST00000613647 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
FGFR3-210ENST00000613647 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
FGFR3-210ENST00000613647 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
FGFR3-210ENST00000613647 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
FGFR3-210ENST00000613647 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms