RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
TRAK1-210ENST00000613405 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
TRAK1-210ENST00000613405 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
TRAK1-210ENST00000613405 SPRR2DP22532 72 aa4.24□□□□□ -1.73
TRAK1-210ENST00000613405 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
TRAK1-210ENST00000613405 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.73
TRAK1-210ENST00000613405 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
TRAK1-210ENST00000613405 MT1MQ8N339 61 aa4.16□□□□□ -1.74
TRAK1-210ENST00000613405 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
TRAK1-210ENST00000613405 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
TRAK1-210ENST00000613405 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
TRAK1-210ENST00000613405 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
TRAK1-210ENST00000613405 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
TRAK1-210ENST00000613405 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
TRAK1-210ENST00000613405 PRM1P04553 51 aa4.03□□□□□ -1.76
TRAK1-210ENST00000613405 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
TRAK1-210ENST00000613405 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
TRAK1-210ENST00000613405 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
TRAK1-210ENST00000613405 USH2AO75445 5202 aa3.95□□□□□ -1.78
TRAK1-210ENST00000613405 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
TRAK1-210ENST00000613405 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
TRAK1-210ENST00000613405 MT3P25713 68 aa3.89□□□□□ -1.79
TRAK1-210ENST00000613405 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
TRAK1-210ENST00000613405 KMT2DO14686 5537 aa3.84□□□□□ -1.8
TRAK1-210ENST00000613405 MT4P47944 62 aa3.82□□□□□ -1.8
TRAK1-210ENST00000613405 MT1AP04731 61 aa3.81□□□□□ -1.8
TRAK1-210ENST00000613405 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
TRAK1-210ENST00000613405 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
TRAK1-210ENST00000613405 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
TRAK1-210ENST00000613405 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
TRAK1-210ENST00000613405 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.82
TRAK1-210ENST00000613405 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
TRAK1-210ENST00000613405 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
TRAK1-210ENST00000613405 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
TRAK1-210ENST00000613405 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
TRAK1-210ENST00000613405 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
TRAK1-210ENST00000613405 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
TRAK1-210ENST00000613405 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
TRAK1-210ENST00000613405 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
TRAK1-210ENST00000613405 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
TRAK1-210ENST00000613405 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
TRAK1-210ENST00000613405 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
TRAK1-210ENST00000613405 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
TRAK1-210ENST00000613405 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
TRAK1-210ENST00000613405 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
TRAK1-210ENST00000613405 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
TRAK1-210ENST00000613405 NEBP20929 6669 aa3.14□□□□□ -1.91
TRAK1-210ENST00000613405 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
TRAK1-210ENST00000613405 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
TRAK1-210ENST00000613405 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
TRAK1-210ENST00000613405 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
TRAK1-210ENST00000613405 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
TRAK1-210ENST00000613405 LCE1CQ5T751 118 aa2.9□□□□□ -1.94
TRAK1-210ENST00000613405 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
TRAK1-210ENST00000613405 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
TRAK1-210ENST00000613405 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
TRAK1-210ENST00000613405 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
TRAK1-210ENST00000613405 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
TRAK1-210ENST00000613405 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
TRAK1-210ENST00000613405 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
TRAK1-210ENST00000613405 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
TRAK1-210ENST00000613405 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
TRAK1-210ENST00000613405 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TRAK1-210ENST00000613405 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
TRAK1-210ENST00000613405 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
TRAK1-210ENST00000613405 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
TRAK1-210ENST00000613405 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
TRAK1-210ENST00000613405 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
TRAK1-210ENST00000613405 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
TRAK1-210ENST00000613405 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
TRAK1-210ENST00000613405 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
TRAK1-210ENST00000613405 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TRAK1-210ENST00000613405 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TRAK1-210ENST00000613405 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TRAK1-210ENST00000613405 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
TRAK1-210ENST00000613405 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
TRAK1-210ENST00000613405 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms