RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 MT1MQ8N339 61 aa4.72□□□□□ -1.65
TNXB-209ENST00000613214 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
TNXB-209ENST00000613214 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
TNXB-209ENST00000613214 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
TNXB-209ENST00000613214 HERC1Q15751 4861 aa4.65□□□□□ -1.66
TNXB-209ENST00000613214 KMT2CQ8NEZ4 4911 aaKnown RBP4.63□□□□□ -1.67
TNXB-209ENST00000613214 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
TNXB-209ENST00000613214 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
TNXB-209ENST00000613214 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
TNXB-209ENST00000613214 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
TNXB-209ENST00000613214 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
TNXB-209ENST00000613214 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
TNXB-209ENST00000613214 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
TNXB-209ENST00000613214 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
TNXB-209ENST00000613214 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
TNXB-209ENST00000613214 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
TNXB-209ENST00000613214 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
TNXB-209ENST00000613214 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TNXB-209ENST00000613214 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TNXB-209ENST00000613214 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
TNXB-209ENST00000613214 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
TNXB-209ENST00000613214 MT1AP04731 61 aa4.27□□□□□ -1.73
TNXB-209ENST00000613214 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
TNXB-209ENST00000613214 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.73
TNXB-209ENST00000613214 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
TNXB-209ENST00000613214 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
TNXB-209ENST00000613214 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
TNXB-209ENST00000613214 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
TNXB-209ENST00000613214 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
TNXB-209ENST00000613214 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
TNXB-209ENST00000613214 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
TNXB-209ENST00000613214 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
TNXB-209ENST00000613214 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
TNXB-209ENST00000613214 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
TNXB-209ENST00000613214 MUC2Q02817 5179 aa4.01□□□□□ -1.77
TNXB-209ENST00000613214 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
TNXB-209ENST00000613214 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
TNXB-209ENST00000613214 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
TNXB-209ENST00000613214 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
TNXB-209ENST00000613214 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
TNXB-209ENST00000613214 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
TNXB-209ENST00000613214 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
TNXB-209ENST00000613214 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
TNXB-209ENST00000613214 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
TNXB-209ENST00000613214 KMT2DO14686 5537 aa3.64□□□□□ -1.83
TNXB-209ENST00000613214 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
TNXB-209ENST00000613214 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
TNXB-209ENST00000613214 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
TNXB-209ENST00000613214 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
TNXB-209ENST00000613214 USH2AO75445 5202 aa3.43□□□□□ -1.86
TNXB-209ENST00000613214 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
TNXB-209ENST00000613214 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
TNXB-209ENST00000613214 NEBP20929 6669 aa3.2□□□□□ -1.9
TNXB-209ENST00000613214 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
TNXB-209ENST00000613214 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
TNXB-209ENST00000613214 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
TNXB-209ENST00000613214 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
TNXB-209ENST00000613214 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
TNXB-209ENST00000613214 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
TNXB-209ENST00000613214 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
TNXB-209ENST00000613214 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
TNXB-209ENST00000613214 KRTAP5-8O75690 187 aa2.53□□□□□ -2.01
TNXB-209ENST00000613214 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
TNXB-209ENST00000613214 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
TNXB-209ENST00000613214 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
TNXB-209ENST00000613214 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
TNXB-209ENST00000613214 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
TNXB-209ENST00000613214 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
TNXB-209ENST00000613214 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
TNXB-209ENST00000613214 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TNXB-209ENST00000613214 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
TNXB-209ENST00000613214 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
TNXB-209ENST00000613214 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
TNXB-209ENST00000613214 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
TNXB-209ENST00000613214 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
TNXB-209ENST00000613214 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
TNXB-209ENST00000613214 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms