RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
SMAD6-205ENST00000612349 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.33
SMAD6-205ENST00000612349 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
SMAD6-205ENST00000612349 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
SMAD6-205ENST00000612349 FAT4Q6V0I7 4981 aa6.61□□□□□ -1.35
SMAD6-205ENST00000612349 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
SMAD6-205ENST00000612349 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
SMAD6-205ENST00000612349 MT1MQ8N339 61 aa6.58□□□□□ -1.36
SMAD6-205ENST00000612349 MT3P25713 68 aa6.54□□□□□ -1.36
SMAD6-205ENST00000612349 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
SMAD6-205ENST00000612349 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
SMAD6-205ENST00000612349 MT4P47944 62 aa6.37□□□□□ -1.39
SMAD6-205ENST00000612349 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
SMAD6-205ENST00000612349 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
SMAD6-205ENST00000612349 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
SMAD6-205ENST00000612349 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
SMAD6-205ENST00000612349 MUC2Q02817 5179 aa6.29□□□□□ -1.4
SMAD6-205ENST00000612349 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
SMAD6-205ENST00000612349 MT1AP04731 61 aa6.17□□□□□ -1.42
SMAD6-205ENST00000612349 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
SMAD6-205ENST00000612349 PRM1P04553 51 aa6.12□□□□□ -1.43
SMAD6-205ENST00000612349 LCE1BQ5T7P3 118 aa6.11□□□□□ -1.43
SMAD6-205ENST00000612349 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
SMAD6-205ENST00000612349 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
SMAD6-205ENST00000612349 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
SMAD6-205ENST00000612349 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
SMAD6-205ENST00000612349 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
SMAD6-205ENST00000612349 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
SMAD6-205ENST00000612349 OBSCNQ5VST9 7968 aa5.93□□□□□ -1.46
SMAD6-205ENST00000612349 KRTAP2-2Q9BYT5 123 aa5.87□□□□□ -1.47
SMAD6-205ENST00000612349 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
SMAD6-205ENST00000612349 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
SMAD6-205ENST00000612349 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
SMAD6-205ENST00000612349 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
SMAD6-205ENST00000612349 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
SMAD6-205ENST00000612349 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
SMAD6-205ENST00000612349 USH2AO75445 5202 aa5.62□□□□□ -1.51
SMAD6-205ENST00000612349 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
SMAD6-205ENST00000612349 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
SMAD6-205ENST00000612349 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SMAD6-205ENST00000612349 KMT2DO14686 5537 aa5.28□□□□□ -1.56
SMAD6-205ENST00000612349 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
SMAD6-205ENST00000612349 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
SMAD6-205ENST00000612349 NEBP20929 6669 aa5.23□□□□□ -1.57
SMAD6-205ENST00000612349 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
SMAD6-205ENST00000612349 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
SMAD6-205ENST00000612349 LCE1FQ5T754 118 aa5.21□□□□□ -1.58
SMAD6-205ENST00000612349 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
SMAD6-205ENST00000612349 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
SMAD6-205ENST00000612349 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
SMAD6-205ENST00000612349 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
SMAD6-205ENST00000612349 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
SMAD6-205ENST00000612349 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
SMAD6-205ENST00000612349 MUC19Q7Z5P9 8384 aa4.75□□□□□ -1.65
SMAD6-205ENST00000612349 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
SMAD6-205ENST00000612349 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SMAD6-205ENST00000612349 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
SMAD6-205ENST00000612349 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SMAD6-205ENST00000612349 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
SMAD6-205ENST00000612349 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
SMAD6-205ENST00000612349 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
SMAD6-205ENST00000612349 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
SMAD6-205ENST00000612349 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
SMAD6-205ENST00000612349 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
SMAD6-205ENST00000612349 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
SMAD6-205ENST00000612349 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
SMAD6-205ENST00000612349 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
SMAD6-205ENST00000612349 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
SMAD6-205ENST00000612349 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SMAD6-205ENST00000612349 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
SMAD6-205ENST00000612349 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
SMAD6-205ENST00000612349 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SMAD6-205ENST00000612349 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SMAD6-205ENST00000612349 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
SMAD6-205ENST00000612349 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SMAD6-205ENST00000612349 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
SMAD6-205ENST00000612349 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
SMAD6-205ENST00000612349 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 76 ms