RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
HMGB1P50-201ENST00000605814 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
HMGB1P50-201ENST00000605814 LPAP08519 4548 aa1.55□□□□□ -2.16
HMGB1P50-201ENST00000605814 KMT2CQ8NEZ4 4911 aaKnown RBP1.55□□□□□ -2.16
HMGB1P50-201ENST00000605814 RYR2Q92736 4967 aa1.54□□□□□ -2.16
HMGB1P50-201ENST00000605814 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
HMGB1P50-201ENST00000605814 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
HMGB1P50-201ENST00000605814 RYR1P21817 5038 aa1.52□□□□□ -2.17
HMGB1P50-201ENST00000605814 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
HMGB1P50-201ENST00000605814 KRTAP19-8Q3LI54 63 aa1.52□□□□□ -2.17
HMGB1P50-201ENST00000605814 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
HMGB1P50-201ENST00000605814 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
HMGB1P50-201ENST00000605814 KRTAP21-3Q3LHN1 58 aa1.51□□□□□ -2.17
HMGB1P50-201ENST00000605814 MT1XP80297 61 aa1.45□□□□□ -2.18
HMGB1P50-201ENST00000605814 RYR3Q15413 4870 aa1.43□□□□□ -2.18
HMGB1P50-201ENST00000605814 MT1BP07438 61 aa1.42□□□□□ -2.18
HMGB1P50-201ENST00000605814 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
HMGB1P50-201ENST00000605814 MT2AP02795 61 aa1.4□□□□□ -2.19
HMGB1P50-201ENST00000605814 M0R2T5 61 aa1.39□□□□□ -2.19
HMGB1P50-201ENST00000605814 BIRC6Q9NR09 4857 aa1.39□□□□□ -2.19
HMGB1P50-201ENST00000605814 MT1FP04733 61 aa1.38□□□□□ -2.19
HMGB1P50-201ENST00000605814 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
HMGB1P50-201ENST00000605814 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
HMGB1P50-201ENST00000605814 HERC2O95714 4834 aa1.37□□□□□ -2.19
HMGB1P50-201ENST00000605814 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
HMGB1P50-201ENST00000605814 ABCA13Q86UQ4 5058 aa1.35□□□□□ -2.19
HMGB1P50-201ENST00000605814 MT1HP80294 61 aa1.35□□□□□ -2.19
HMGB1P50-201ENST00000605814 MT1EP04732 61 aa1.33□□□□□ -2.2
HMGB1P50-201ENST00000605814 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
HMGB1P50-201ENST00000605814 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
HMGB1P50-201ENST00000605814 MT1LQ93083 61 aa1.31□□□□□ -2.2
HMGB1P50-201ENST00000605814 MUC2Q02817 5179 aa1.3□□□□□ -2.2
HMGB1P50-201ENST00000605814 PCLOQ9Y6V0 5065 aa1.29□□□□□ -2.2
HMGB1P50-201ENST00000605814 MT1AP04731 61 aa1.28□□□□□ -2.2
HMGB1P50-201ENST00000605814 UBR4Q5T4S7 5183 aa1.27□□□□□ -2.21
HMGB1P50-201ENST00000605814 EPPK1P58107 5090 aaKnown RBP1.27□□□□□ -2.21
HMGB1P50-201ENST00000605814 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
HMGB1P50-201ENST00000605814 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
HMGB1P50-201ENST00000605814 MT1GP13640 62 aa1.18□□□□□ -2.22
HMGB1P50-201ENST00000605814 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
HMGB1P50-201ENST00000605814 PRM1P04553 51 aa1.17□□□□□ -2.22
HMGB1P50-201ENST00000605814 FAT4Q6V0I7 4981 aa1.17□□□□□ -2.22
HMGB1P50-201ENST00000605814 MT1MQ8N339 61 aa1.15□□□□□ -2.23
HMGB1P50-201ENST00000605814 RNF213Q63HN8 5207 aa1.13□□□□□ -2.23
HMGB1P50-201ENST00000605814 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
HMGB1P50-201ENST00000605814 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
HMGB1P50-201ENST00000605814 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
HMGB1P50-201ENST00000605814 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
HMGB1P50-201ENST00000605814 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
HMGB1P50-201ENST00000605814 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P50-201ENST00000605814 KMT2DO14686 5537 aa1.06□□□□□ -2.24
HMGB1P50-201ENST00000605814 SPRR2AP35326 72 aa1.06□□□□□ -2.24
HMGB1P50-201ENST00000605814 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
HMGB1P50-201ENST00000605814 SPRR2BP35325 72 aa1.03□□□□□ -2.24
HMGB1P50-201ENST00000605814 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
HMGB1P50-201ENST00000605814 SPRR2EP22531 72 aa1.02□□□□□ -2.25
HMGB1P50-201ENST00000605814 USH2AO75445 5202 aa1.02□□□□□ -2.25
HMGB1P50-201ENST00000605814 SPRR2DP22532 72 aa0.98□□□□□ -2.25
HMGB1P50-201ENST00000605814 MUC12Q9UKN1 5478 aa0.89□□□□□ -2.27
HMGB1P50-201ENST00000605814 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
HMGB1P50-201ENST00000605814 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
HMGB1P50-201ENST00000605814 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
HMGB1P50-201ENST00000605814 FSIP2Q5CZC0 6907 aa0.83□□□□□ -2.28
HMGB1P50-201ENST00000605814 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
HMGB1P50-201ENST00000605814 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
HMGB1P50-201ENST00000605814 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
HMGB1P50-201ENST00000605814 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
HMGB1P50-201ENST00000605814 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
HMGB1P50-201ENST00000605814 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
HMGB1P50-201ENST00000605814 NEBP20929 6669 aa0.68□□□□□ -2.3
HMGB1P50-201ENST00000605814 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
HMGB1P50-201ENST00000605814 KRTAP20-1Q3LI63 56 aa0.65□□□□□ -2.31
HMGB1P50-201ENST00000605814 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P50-201ENST00000605814 MT4P47944 62 aa0.6□□□□□ -2.31
HMGB1P50-201ENST00000605814 GPR98Q8WXG9 6306 aa0.57□□□□□ -2.32
HMGB1P50-201ENST00000605814 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
HMGB1P50-201ENST00000605814 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 80.1 ms