RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
COMMD3-BMI1-206ENST00000602395 ABCA13Q86UQ4 5058 aa2.56□□□□□ -2
COMMD3-BMI1-206ENST00000602395 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
COMMD3-BMI1-206ENST00000602395 HERC1Q15751 4861 aa2.53□□□□□ -2
COMMD3-BMI1-206ENST00000602395 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
COMMD3-BMI1-206ENST00000602395 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
COMMD3-BMI1-206ENST00000602395 BIRC6Q9NR09 4857 aa2.52□□□□□ -2.01
COMMD3-BMI1-206ENST00000602395 HERC2O95714 4834 aa2.5□□□□□ -2.01
COMMD3-BMI1-206ENST00000602395 FLGP20930 4061 aaPredicted RBP2.46□□□□□ -2.02
COMMD3-BMI1-206ENST00000602395 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
COMMD3-BMI1-206ENST00000602395 R4GN34 69 aa2.46□□□□□ -2.02
COMMD3-BMI1-206ENST00000602395 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
COMMD3-BMI1-206ENST00000602395 MUC2Q02817 5179 aa2.35□□□□□ -2.03
COMMD3-BMI1-206ENST00000602395 PCLOQ9Y6V0 5065 aa2.34□□□□□ -2.03
COMMD3-BMI1-206ENST00000602395 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
COMMD3-BMI1-206ENST00000602395 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
COMMD3-BMI1-206ENST00000602395 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
COMMD3-BMI1-206ENST00000602395 TNP1P09430 55 aa2.28□□□□□ -2.04
COMMD3-BMI1-206ENST00000602395 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
COMMD3-BMI1-206ENST00000602395 MT1HP80294 61 aa2.26□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 MT2AP02795 61 aa2.24□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 KRTAP19-8Q3LI54 63 aa2.24□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 MT1FP04733 61 aa2.23□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
COMMD3-BMI1-206ENST00000602395 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 MT1BP07438 61 aa2.19□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 M0R2T5 61 aa2.16□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 MT1XP80297 61 aa2.16□□□□□ -2.06
COMMD3-BMI1-206ENST00000602395 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
COMMD3-BMI1-206ENST00000602395 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
COMMD3-BMI1-206ENST00000602395 USH2AO75445 5202 aa1.98□□□□□ -2.09
COMMD3-BMI1-206ENST00000602395 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
COMMD3-BMI1-206ENST00000602395 INE1O15225 51 aa1.96□□□□□ -2.1
COMMD3-BMI1-206ENST00000602395 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
COMMD3-BMI1-206ENST00000602395 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 KMT2DO14686 5537 aa1.88□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 MT1EP04732 61 aa1.88□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 MT1LQ93083 61 aa1.88□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 KRTAP19-6Q3LI70 58 aa1.86□□□□□ -2.11
COMMD3-BMI1-206ENST00000602395 MT1MQ8N339 61 aa1.75□□□□□ -2.13
COMMD3-BMI1-206ENST00000602395 MT1GP13640 62 aa1.74□□□□□ -2.13
COMMD3-BMI1-206ENST00000602395 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
COMMD3-BMI1-206ENST00000602395 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
COMMD3-BMI1-206ENST00000602395 MT1AP04731 61 aa1.61□□□□□ -2.15
COMMD3-BMI1-206ENST00000602395 SPRR2FQ96RM1 72 aa1.61□□□□□ -2.15
COMMD3-BMI1-206ENST00000602395 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
COMMD3-BMI1-206ENST00000602395 FSIP2Q5CZC0 6907 aa1.58□□□□□ -2.16
COMMD3-BMI1-206ENST00000602395 MDN1Q9NU22 5596 aa1.51□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 SPRR2EP22531 72 aa1.47□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 SPRR2BP35325 72 aa1.47□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 SPRR2AP35326 72 aa1.47□□□□□ -2.17
COMMD3-BMI1-206ENST00000602395 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
COMMD3-BMI1-206ENST00000602395 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
COMMD3-BMI1-206ENST00000602395 PRM1P04553 51 aa1.41□□□□□ -2.18
COMMD3-BMI1-206ENST00000602395 SPRR2DP22532 72 aa1.41□□□□□ -2.18
COMMD3-BMI1-206ENST00000602395 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
COMMD3-BMI1-206ENST00000602395 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
COMMD3-BMI1-206ENST00000602395 NEBP20929 6669 aa1.3□□□□□ -2.2
COMMD3-BMI1-206ENST00000602395 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
COMMD3-BMI1-206ENST00000602395 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
COMMD3-BMI1-206ENST00000602395 MT4P47944 62 aa1.22□□□□□ -2.21
COMMD3-BMI1-206ENST00000602395 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
COMMD3-BMI1-206ENST00000602395 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
COMMD3-BMI1-206ENST00000602395 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
COMMD3-BMI1-206ENST00000602395 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
COMMD3-BMI1-206ENST00000602395 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
COMMD3-BMI1-206ENST00000602395 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
COMMD3-BMI1-206ENST00000602395 GPR98Q8WXG9 6306 aa0.78□□□□□ -2.28
COMMD3-BMI1-206ENST00000602395 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 36 ms