RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
FARP1-214ENST00000595437 MT1MQ8N339 61 aa4.88□□□□□ -1.63
FARP1-214ENST00000595437 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
FARP1-214ENST00000595437 SPRR2DP22532 72 aa4.87□□□□□ -1.63
FARP1-214ENST00000595437 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
FARP1-214ENST00000595437 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
FARP1-214ENST00000595437 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
FARP1-214ENST00000595437 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
FARP1-214ENST00000595437 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
FARP1-214ENST00000595437 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
FARP1-214ENST00000595437 KRTAP2-1Q9BYU5 128 aa4.67□□□□□ -1.66
FARP1-214ENST00000595437 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
FARP1-214ENST00000595437 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
FARP1-214ENST00000595437 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
FARP1-214ENST00000595437 MT1AP04731 61 aa4.52□□□□□ -1.69
FARP1-214ENST00000595437 MT3P25713 68 aa4.5□□□□□ -1.69
FARP1-214ENST00000595437 USH2AO75445 5202 aa4.47□□□□□ -1.69
FARP1-214ENST00000595437 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
FARP1-214ENST00000595437 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
FARP1-214ENST00000595437 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
FARP1-214ENST00000595437 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
FARP1-214ENST00000595437 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
FARP1-214ENST00000595437 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
FARP1-214ENST00000595437 PRM1P04553 51 aa4.24□□□□□ -1.73
FARP1-214ENST00000595437 MT4P47944 62 aa4.22□□□□□ -1.73
FARP1-214ENST00000595437 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
FARP1-214ENST00000595437 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
FARP1-214ENST00000595437 KMT2DO14686 5537 aa4.16□□□□□ -1.74
FARP1-214ENST00000595437 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
FARP1-214ENST00000595437 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
FARP1-214ENST00000595437 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
FARP1-214ENST00000595437 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
FARP1-214ENST00000595437 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
FARP1-214ENST00000595437 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
FARP1-214ENST00000595437 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
FARP1-214ENST00000595437 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
FARP1-214ENST00000595437 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
FARP1-214ENST00000595437 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
FARP1-214ENST00000595437 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
FARP1-214ENST00000595437 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
FARP1-214ENST00000595437 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
FARP1-214ENST00000595437 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
FARP1-214ENST00000595437 MUC12Q9UKN1 5478 aa3.91□□□□□ -1.78
FARP1-214ENST00000595437 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
FARP1-214ENST00000595437 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
FARP1-214ENST00000595437 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
FARP1-214ENST00000595437 NEBP20929 6669 aa3.58□□□□□ -1.84
FARP1-214ENST00000595437 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
FARP1-214ENST00000595437 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
FARP1-214ENST00000595437 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
FARP1-214ENST00000595437 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
FARP1-214ENST00000595437 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
FARP1-214ENST00000595437 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
FARP1-214ENST00000595437 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
FARP1-214ENST00000595437 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
FARP1-214ENST00000595437 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
FARP1-214ENST00000595437 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
FARP1-214ENST00000595437 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
FARP1-214ENST00000595437 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
FARP1-214ENST00000595437 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
FARP1-214ENST00000595437 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
FARP1-214ENST00000595437 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
FARP1-214ENST00000595437 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
FARP1-214ENST00000595437 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
FARP1-214ENST00000595437 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
FARP1-214ENST00000595437 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
FARP1-214ENST00000595437 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
FARP1-214ENST00000595437 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
FARP1-214ENST00000595437 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
FARP1-214ENST00000595437 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
FARP1-214ENST00000595437 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
FARP1-214ENST00000595437 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
FARP1-214ENST00000595437 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
FARP1-214ENST00000595437 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
FARP1-214ENST00000595437 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
FARP1-214ENST00000595437 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
FARP1-214ENST00000595437 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 82.2 ms