RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
SYMPK-202ENST00000593504 SPRR2DP22532 72 aa5.01□□□□□ -1.61
SYMPK-202ENST00000593504 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
SYMPK-202ENST00000593504 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
SYMPK-202ENST00000593504 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
SYMPK-202ENST00000593504 MT1MQ8N339 61 aa4.91□□□□□ -1.62
SYMPK-202ENST00000593504 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
SYMPK-202ENST00000593504 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SYMPK-202ENST00000593504 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
SYMPK-202ENST00000593504 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
SYMPK-202ENST00000593504 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
SYMPK-202ENST00000593504 USH2AO75445 5202 aa4.63□□□□□ -1.67
SYMPK-202ENST00000593504 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
SYMPK-202ENST00000593504 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
SYMPK-202ENST00000593504 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
SYMPK-202ENST00000593504 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
SYMPK-202ENST00000593504 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
SYMPK-202ENST00000593504 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
SYMPK-202ENST00000593504 MT1AP04731 61 aa4.49□□□□□ -1.69
SYMPK-202ENST00000593504 MT3P25713 68 aa4.48□□□□□ -1.69
SYMPK-202ENST00000593504 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
SYMPK-202ENST00000593504 PRM1P04553 51 aa4.44□□□□□ -1.7
SYMPK-202ENST00000593504 MT4P47944 62 aa4.44□□□□□ -1.7
SYMPK-202ENST00000593504 KMT2DO14686 5537 aa4.43□□□□□ -1.7
SYMPK-202ENST00000593504 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
SYMPK-202ENST00000593504 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SYMPK-202ENST00000593504 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
SYMPK-202ENST00000593504 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
SYMPK-202ENST00000593504 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
SYMPK-202ENST00000593504 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
SYMPK-202ENST00000593504 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
SYMPK-202ENST00000593504 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
SYMPK-202ENST00000593504 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
SYMPK-202ENST00000593504 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SYMPK-202ENST00000593504 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
SYMPK-202ENST00000593504 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
SYMPK-202ENST00000593504 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SYMPK-202ENST00000593504 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
SYMPK-202ENST00000593504 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
SYMPK-202ENST00000593504 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
SYMPK-202ENST00000593504 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
SYMPK-202ENST00000593504 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
SYMPK-202ENST00000593504 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
SYMPK-202ENST00000593504 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
SYMPK-202ENST00000593504 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
SYMPK-202ENST00000593504 NEBP20929 6669 aa3.73□□□□□ -1.81
SYMPK-202ENST00000593504 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
SYMPK-202ENST00000593504 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
SYMPK-202ENST00000593504 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
SYMPK-202ENST00000593504 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SYMPK-202ENST00000593504 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SYMPK-202ENST00000593504 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SYMPK-202ENST00000593504 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SYMPK-202ENST00000593504 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SYMPK-202ENST00000593504 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SYMPK-202ENST00000593504 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
SYMPK-202ENST00000593504 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
SYMPK-202ENST00000593504 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SYMPK-202ENST00000593504 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SYMPK-202ENST00000593504 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SYMPK-202ENST00000593504 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SYMPK-202ENST00000593504 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
SYMPK-202ENST00000593504 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SYMPK-202ENST00000593504 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
SYMPK-202ENST00000593504 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
SYMPK-202ENST00000593504 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
SYMPK-202ENST00000593504 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.97
SYMPK-202ENST00000593504 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SYMPK-202ENST00000593504 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SYMPK-202ENST00000593504 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
SYMPK-202ENST00000593504 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
SYMPK-202ENST00000593504 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SYMPK-202ENST00000593504 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
SYMPK-202ENST00000593504 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SYMPK-202ENST00000593504 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
SYMPK-202ENST00000593504 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
SYMPK-202ENST00000593504 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SYMPK-202ENST00000593504 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 23.1 ms