RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 SPRR2EP22531 72 aa5.43□□□□□ -1.54
SMARCA4-215ENST00000590574 SPRR2BP35325 72 aa5.43□□□□□ -1.54
SMARCA4-215ENST00000590574 SPRR2AP35326 72 aa5.43□□□□□ -1.54
SMARCA4-215ENST00000590574 MT1MQ8N339 61 aa5.43□□□□□ -1.54
SMARCA4-215ENST00000590574 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
SMARCA4-215ENST00000590574 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
SMARCA4-215ENST00000590574 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
SMARCA4-215ENST00000590574 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
SMARCA4-215ENST00000590574 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
SMARCA4-215ENST00000590574 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
SMARCA4-215ENST00000590574 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
SMARCA4-215ENST00000590574 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SMARCA4-215ENST00000590574 KMT2DO14686 5537 aa5.21□□□□□ -1.58
SMARCA4-215ENST00000590574 USH2AO75445 5202 aa5.13□□□□□ -1.59
SMARCA4-215ENST00000590574 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
SMARCA4-215ENST00000590574 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
SMARCA4-215ENST00000590574 PRM1P04553 51 aa4.97□□□□□ -1.61
SMARCA4-215ENST00000590574 MT1AP04731 61 aa4.96□□□□□ -1.62
SMARCA4-215ENST00000590574 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
SMARCA4-215ENST00000590574 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
SMARCA4-215ENST00000590574 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SMARCA4-215ENST00000590574 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
SMARCA4-215ENST00000590574 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
SMARCA4-215ENST00000590574 MT3P25713 68 aa4.86□□□□□ -1.63
SMARCA4-215ENST00000590574 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SMARCA4-215ENST00000590574 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
SMARCA4-215ENST00000590574 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
SMARCA4-215ENST00000590574 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
SMARCA4-215ENST00000590574 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SMARCA4-215ENST00000590574 MT4P47944 62 aa4.66□□□□□ -1.66
SMARCA4-215ENST00000590574 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
SMARCA4-215ENST00000590574 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
SMARCA4-215ENST00000590574 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
SMARCA4-215ENST00000590574 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
SMARCA4-215ENST00000590574 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
SMARCA4-215ENST00000590574 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
SMARCA4-215ENST00000590574 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SMARCA4-215ENST00000590574 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
SMARCA4-215ENST00000590574 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SMARCA4-215ENST00000590574 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
SMARCA4-215ENST00000590574 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
SMARCA4-215ENST00000590574 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
SMARCA4-215ENST00000590574 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SMARCA4-215ENST00000590574 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SMARCA4-215ENST00000590574 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
SMARCA4-215ENST00000590574 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
SMARCA4-215ENST00000590574 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SMARCA4-215ENST00000590574 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
SMARCA4-215ENST00000590574 NEBP20929 6669 aa3.83□□□□□ -1.8
SMARCA4-215ENST00000590574 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
SMARCA4-215ENST00000590574 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
SMARCA4-215ENST00000590574 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
SMARCA4-215ENST00000590574 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
SMARCA4-215ENST00000590574 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SMARCA4-215ENST00000590574 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SMARCA4-215ENST00000590574 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
SMARCA4-215ENST00000590574 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SMARCA4-215ENST00000590574 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.89
SMARCA4-215ENST00000590574 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
SMARCA4-215ENST00000590574 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SMARCA4-215ENST00000590574 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
SMARCA4-215ENST00000590574 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SMARCA4-215ENST00000590574 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SMARCA4-215ENST00000590574 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
SMARCA4-215ENST00000590574 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
SMARCA4-215ENST00000590574 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SMARCA4-215ENST00000590574 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
SMARCA4-215ENST00000590574 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SMARCA4-215ENST00000590574 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
SMARCA4-215ENST00000590574 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
SMARCA4-215ENST00000590574 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SMARCA4-215ENST00000590574 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
SMARCA4-215ENST00000590574 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
SMARCA4-215ENST00000590574 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
SMARCA4-215ENST00000590574 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SMARCA4-215ENST00000590574 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SMARCA4-215ENST00000590574 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms