RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
BCAS3-220ENST00000588720 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
BCAS3-220ENST00000588720 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
BCAS3-220ENST00000588720 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
BCAS3-220ENST00000588720 USH2AO75445 5202 aa3.81□□□□□ -1.8
BCAS3-220ENST00000588720 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
BCAS3-220ENST00000588720 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
BCAS3-220ENST00000588720 SPRR2DP22532 72 aa3.74□□□□□ -1.81
BCAS3-220ENST00000588720 MT1MQ8N339 61 aa3.74□□□□□ -1.81
BCAS3-220ENST00000588720 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
BCAS3-220ENST00000588720 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
BCAS3-220ENST00000588720 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
BCAS3-220ENST00000588720 MT3P25713 68 aa3.69□□□□□ -1.82
BCAS3-220ENST00000588720 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
BCAS3-220ENST00000588720 KMT2DO14686 5537 aa3.66□□□□□ -1.82
BCAS3-220ENST00000588720 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
BCAS3-220ENST00000588720 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
BCAS3-220ENST00000588720 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
BCAS3-220ENST00000588720 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
BCAS3-220ENST00000588720 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
BCAS3-220ENST00000588720 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
BCAS3-220ENST00000588720 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
BCAS3-220ENST00000588720 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
BCAS3-220ENST00000588720 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
BCAS3-220ENST00000588720 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
BCAS3-220ENST00000588720 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
BCAS3-220ENST00000588720 PRM1P04553 51 aa3.42□□□□□ -1.86
BCAS3-220ENST00000588720 MT1AP04731 61 aa3.41□□□□□ -1.86
BCAS3-220ENST00000588720 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
BCAS3-220ENST00000588720 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
BCAS3-220ENST00000588720 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
BCAS3-220ENST00000588720 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
BCAS3-220ENST00000588720 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
BCAS3-220ENST00000588720 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
BCAS3-220ENST00000588720 MT4P47944 62 aa3.28□□□□□ -1.88
BCAS3-220ENST00000588720 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
BCAS3-220ENST00000588720 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
BCAS3-220ENST00000588720 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
BCAS3-220ENST00000588720 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
BCAS3-220ENST00000588720 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
BCAS3-220ENST00000588720 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
BCAS3-220ENST00000588720 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
BCAS3-220ENST00000588720 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
BCAS3-220ENST00000588720 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
BCAS3-220ENST00000588720 LCE1DQ5T752 114 aa3□□□□□ -1.93
BCAS3-220ENST00000588720 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
BCAS3-220ENST00000588720 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
BCAS3-220ENST00000588720 NEBP20929 6669 aa2.91□□□□□ -1.94
BCAS3-220ENST00000588720 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
BCAS3-220ENST00000588720 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
BCAS3-220ENST00000588720 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
BCAS3-220ENST00000588720 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
BCAS3-220ENST00000588720 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
BCAS3-220ENST00000588720 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
BCAS3-220ENST00000588720 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
BCAS3-220ENST00000588720 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
BCAS3-220ENST00000588720 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
BCAS3-220ENST00000588720 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
BCAS3-220ENST00000588720 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
BCAS3-220ENST00000588720 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
BCAS3-220ENST00000588720 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
BCAS3-220ENST00000588720 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
BCAS3-220ENST00000588720 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
BCAS3-220ENST00000588720 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
BCAS3-220ENST00000588720 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
BCAS3-220ENST00000588720 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
BCAS3-220ENST00000588720 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
BCAS3-220ENST00000588720 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
BCAS3-220ENST00000588720 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
BCAS3-220ENST00000588720 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
BCAS3-220ENST00000588720 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
BCAS3-220ENST00000588720 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
BCAS3-220ENST00000588720 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
BCAS3-220ENST00000588720 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
BCAS3-220ENST00000588720 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
BCAS3-220ENST00000588720 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
BCAS3-220ENST00000588720 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
BCAS3-220ENST00000588720 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 47 ms