RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 MT1MQ8N339 61 aa4.26□□□□□ -1.73
PTPRS-204ENST00000587303 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
PTPRS-204ENST00000587303 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
PTPRS-204ENST00000587303 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
PTPRS-204ENST00000587303 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
PTPRS-204ENST00000587303 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
PTPRS-204ENST00000587303 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
PTPRS-204ENST00000587303 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
PTPRS-204ENST00000587303 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
PTPRS-204ENST00000587303 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
PTPRS-204ENST00000587303 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
PTPRS-204ENST00000587303 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
PTPRS-204ENST00000587303 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
PTPRS-204ENST00000587303 MT1AP04731 61 aa3.95□□□□□ -1.78
PTPRS-204ENST00000587303 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
PTPRS-204ENST00000587303 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
PTPRS-204ENST00000587303 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
PTPRS-204ENST00000587303 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
PTPRS-204ENST00000587303 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
PTPRS-204ENST00000587303 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
PTPRS-204ENST00000587303 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
PTPRS-204ENST00000587303 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
PTPRS-204ENST00000587303 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
PTPRS-204ENST00000587303 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
PTPRS-204ENST00000587303 ABCA13Q86UQ4 5058 aa3.86□□□□□ -1.79
PTPRS-204ENST00000587303 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
PTPRS-204ENST00000587303 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
PTPRS-204ENST00000587303 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
PTPRS-204ENST00000587303 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
PTPRS-204ENST00000587303 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
PTPRS-204ENST00000587303 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
PTPRS-204ENST00000587303 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
PTPRS-204ENST00000587303 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
PTPRS-204ENST00000587303 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
PTPRS-204ENST00000587303 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
PTPRS-204ENST00000587303 MUC2Q02817 5179 aa3.69□□□□□ -1.82
PTPRS-204ENST00000587303 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
PTPRS-204ENST00000587303 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
PTPRS-204ENST00000587303 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
PTPRS-204ENST00000587303 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
PTPRS-204ENST00000587303 KMT2DO14686 5537 aa3.38□□□□□ -1.87
PTPRS-204ENST00000587303 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
PTPRS-204ENST00000587303 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
PTPRS-204ENST00000587303 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
PTPRS-204ENST00000587303 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
PTPRS-204ENST00000587303 USH2AO75445 5202 aa3.16□□□□□ -1.9
PTPRS-204ENST00000587303 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
PTPRS-204ENST00000587303 NEBP20929 6669 aa3.14□□□□□ -1.91
PTPRS-204ENST00000587303 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
PTPRS-204ENST00000587303 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
PTPRS-204ENST00000587303 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
PTPRS-204ENST00000587303 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
PTPRS-204ENST00000587303 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
PTPRS-204ENST00000587303 SSPOA2VEC9 5147 aa3.03□□□□□ -1.92
PTPRS-204ENST00000587303 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
PTPRS-204ENST00000587303 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
PTPRS-204ENST00000587303 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
PTPRS-204ENST00000587303 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
PTPRS-204ENST00000587303 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
PTPRS-204ENST00000587303 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
PTPRS-204ENST00000587303 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
PTPRS-204ENST00000587303 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PTPRS-204ENST00000587303 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
PTPRS-204ENST00000587303 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
PTPRS-204ENST00000587303 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
PTPRS-204ENST00000587303 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
PTPRS-204ENST00000587303 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
PTPRS-204ENST00000587303 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
PTPRS-204ENST00000587303 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PTPRS-204ENST00000587303 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
PTPRS-204ENST00000587303 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
PTPRS-204ENST00000587303 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PTPRS-204ENST00000587303 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
PTPRS-204ENST00000587303 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
PTPRS-204ENST00000587303 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
PTPRS-204ENST00000587303 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
PTPRS-204ENST00000587303 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms