RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
PTPRM-215ENST00000583289 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
PTPRM-215ENST00000583289 M0R2T5 61 aa1.97□□□□□ -2.09
PTPRM-215ENST00000583289 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
PTPRM-215ENST00000583289 HERC2O95714 4834 aa1.96□□□□□ -2.1
PTPRM-215ENST00000583289 BIRC6Q9NR09 4857 aa1.95□□□□□ -2.1
PTPRM-215ENST00000583289 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
PTPRM-215ENST00000583289 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
PTPRM-215ENST00000583289 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
PTPRM-215ENST00000583289 LPAP08519 4548 aa1.92□□□□□ -2.1
PTPRM-215ENST00000583289 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
PTPRM-215ENST00000583289 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
PTPRM-215ENST00000583289 MT1HP80294 61 aa1.9□□□□□ -2.11
PTPRM-215ENST00000583289 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
PTPRM-215ENST00000583289 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
PTPRM-215ENST00000583289 HERC1Q15751 4861 aa1.87□□□□□ -2.11
PTPRM-215ENST00000583289 MT2AP02795 61 aa1.86□□□□□ -2.11
PTPRM-215ENST00000583289 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
PTPRM-215ENST00000583289 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
PTPRM-215ENST00000583289 MT1FP04733 61 aa1.83□□□□□ -2.12
PTPRM-215ENST00000583289 MUC2Q02817 5179 aa1.82□□□□□ -2.12
PTPRM-215ENST00000583289 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
PTPRM-215ENST00000583289 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
PTPRM-215ENST00000583289 MT1BP07438 61 aa1.78□□□□□ -2.12
PTPRM-215ENST00000583289 UBR4Q5T4S7 5183 aa1.77□□□□□ -2.13
PTPRM-215ENST00000583289 MT1XP80297 61 aa1.76□□□□□ -2.13
PTPRM-215ENST00000583289 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
PTPRM-215ENST00000583289 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PTPRM-215ENST00000583289 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
PTPRM-215ENST00000583289 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
PTPRM-215ENST00000583289 INE1O15225 51 aa1.66□□□□□ -2.14
PTPRM-215ENST00000583289 KRTAP19-5Q3LI72 72 aa1.64□□□□□ -2.15
PTPRM-215ENST00000583289 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
PTPRM-215ENST00000583289 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
PTPRM-215ENST00000583289 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
PTPRM-215ENST00000583289 USH2AO75445 5202 aa1.56□□□□□ -2.16
PTPRM-215ENST00000583289 MT1EP04732 61 aa1.55□□□□□ -2.16
PTPRM-215ENST00000583289 MT1LQ93083 61 aa1.54□□□□□ -2.16
PTPRM-215ENST00000583289 MT1GP13640 62 aa1.53□□□□□ -2.16
PTPRM-215ENST00000583289 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
PTPRM-215ENST00000583289 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
PTPRM-215ENST00000583289 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
PTPRM-215ENST00000583289 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
PTPRM-215ENST00000583289 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
PTPRM-215ENST00000583289 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
PTPRM-215ENST00000583289 MT1MQ8N339 61 aa1.45□□□□□ -2.18
PTPRM-215ENST00000583289 KMT2DO14686 5537 aa1.43□□□□□ -2.18
PTPRM-215ENST00000583289 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
PTPRM-215ENST00000583289 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
PTPRM-215ENST00000583289 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
PTPRM-215ENST00000583289 MT1AP04731 61 aa1.37□□□□□ -2.19
PTPRM-215ENST00000583289 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
PTPRM-215ENST00000583289 SPRR2EP22531 72 aa1.31□□□□□ -2.2
PTPRM-215ENST00000583289 SPRR2BP35325 72 aa1.31□□□□□ -2.2
PTPRM-215ENST00000583289 SPRR2AP35326 72 aa1.31□□□□□ -2.2
PTPRM-215ENST00000583289 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
PTPRM-215ENST00000583289 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
PTPRM-215ENST00000583289 SPRR2DP22532 72 aa1.26□□□□□ -2.21
PTPRM-215ENST00000583289 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
PTPRM-215ENST00000583289 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
PTPRM-215ENST00000583289 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
PTPRM-215ENST00000583289 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
PTPRM-215ENST00000583289 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
PTPRM-215ENST00000583289 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
PTPRM-215ENST00000583289 PRM1P04553 51 aa1.12□□□□□ -2.23
PTPRM-215ENST00000583289 NEBP20929 6669 aa1.08□□□□□ -2.24
PTPRM-215ENST00000583289 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
PTPRM-215ENST00000583289 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
PTPRM-215ENST00000583289 MT4P47944 62 aa1.06□□□□□ -2.24
PTPRM-215ENST00000583289 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
PTPRM-215ENST00000583289 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
PTPRM-215ENST00000583289 GPR98Q8WXG9 6306 aa0.85□□□□□ -2.27
PTPRM-215ENST00000583289 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
PTPRM-215ENST00000583289 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
PTPRM-215ENST00000583289 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
PTPRM-215ENST00000583289 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
PTPRM-215ENST00000583289 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
PTPRM-215ENST00000583289 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 168.9 ms