RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 MT4P47944 62 aa1.99□□□□□ -2.09
RTTN-209ENST00000583043 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
RTTN-209ENST00000583043 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
RTTN-209ENST00000583043 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
RTTN-209ENST00000583043 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
RTTN-209ENST00000583043 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
RTTN-209ENST00000583043 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
RTTN-209ENST00000583043 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
RTTN-209ENST00000583043 KRTAP4-8Q9BYQ9 185 aa1.92□□□□□ -2.1
RTTN-209ENST00000583043 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
RTTN-209ENST00000583043 MT1MQ8N339 61 aa1.9□□□□□ -2.11
RTTN-209ENST00000583043 MUC2Q02817 5179 aa1.86□□□□□ -2.11
RTTN-209ENST00000583043 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
RTTN-209ENST00000583043 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.11
RTTN-209ENST00000583043 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.84□□□□□ -2.12
RTTN-209ENST00000583043 MT1AP04731 61 aa1.81□□□□□ -2.12
RTTN-209ENST00000583043 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
RTTN-209ENST00000583043 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
RTTN-209ENST00000583043 KRTAP2-2Q9BYT5 123 aa1.8□□□□□ -2.12
RTTN-209ENST00000583043 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
RTTN-209ENST00000583043 LCE5AQ5TCM9 118 aa1.78□□□□□ -2.12
RTTN-209ENST00000583043 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
RTTN-209ENST00000583043 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
RTTN-209ENST00000583043 USH2AO75445 5202 aa1.74□□□□□ -2.13
RTTN-209ENST00000583043 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
RTTN-209ENST00000583043 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
RTTN-209ENST00000583043 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
RTTN-209ENST00000583043 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
RTTN-209ENST00000583043 KRTAP9-9Q9BYP9 154 aa1.72□□□□□ -2.13
RTTN-209ENST00000583043 SYNE2Q8WXH0 6885 aaKnown RBP1.71□□□□□ -2.14
RTTN-209ENST00000583043 KRTAP4-9Q9BYQ8 210 aa1.71□□□□□ -2.14
RTTN-209ENST00000583043 LCE1DQ5T752 114 aa1.7□□□□□ -2.14
RTTN-209ENST00000583043 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
RTTN-209ENST00000583043 LOC100996750A0A140TA64 210 aa1.66□□□□□ -2.14
RTTN-209ENST00000583043 KRTAP9-4Q9BYQ2 154 aa1.66□□□□□ -2.14
RTTN-209ENST00000583043 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
RTTN-209ENST00000583043 LCE4AQ5TA78 99 aa1.65□□□□□ -2.14
RTTN-209ENST00000583043 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
RTTN-209ENST00000583043 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
RTTN-209ENST00000583043 PRM1P04553 51 aa1.56□□□□□ -2.16
RTTN-209ENST00000583043 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
RTTN-209ENST00000583043 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
RTTN-209ENST00000583043 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
RTTN-209ENST00000583043 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
RTTN-209ENST00000583043 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
RTTN-209ENST00000583043 KMT2DO14686 5537 aa1.5□□□□□ -2.17
RTTN-209ENST00000583043 NEBP20929 6669 aa1.49□□□□□ -2.17
RTTN-209ENST00000583043 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
RTTN-209ENST00000583043 KRTAP5-4Q6L8H1 288 aa1.41□□□□□ -2.18
RTTN-209ENST00000583043 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.18
RTTN-209ENST00000583043 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
RTTN-209ENST00000583043 KRTAP4-6Q9BYQ5 205 aa1.37□□□□□ -2.19
RTTN-209ENST00000583043 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
RTTN-209ENST00000583043 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
RTTN-209ENST00000583043 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
RTTN-209ENST00000583043 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
RTTN-209ENST00000583043 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
RTTN-209ENST00000583043 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
RTTN-209ENST00000583043 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
RTTN-209ENST00000583043 KRTAP4-12Q9BQ66 201 aa1.22□□□□□ -2.21
RTTN-209ENST00000583043 KRTAP5-3Q6L8H2 238 aa1.21□□□□□ -2.22
RTTN-209ENST00000583043 KRTAP4-11Q9BYQ6 195 aa1.18□□□□□ -2.22
RTTN-209ENST00000583043 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
RTTN-209ENST00000583043 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
RTTN-209ENST00000583043 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
RTTN-209ENST00000583043 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
RTTN-209ENST00000583043 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
RTTN-209ENST00000583043 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
RTTN-209ENST00000583043 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
RTTN-209ENST00000583043 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
RTTN-209ENST00000583043 KRTAP5-7Q6L8G8 165 aa1.06□□□□□ -2.24
RTTN-209ENST00000583043 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
RTTN-209ENST00000583043 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
RTTN-209ENST00000583043 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
RTTN-209ENST00000583043 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
RTTN-209ENST00000583043 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
RTTN-209ENST00000583043 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
RTTN-209ENST00000583043 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms