RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
CDH8-207ENST00000582242 LPAP08519 4548 aa3.54□□□□□ -1.84
CDH8-207ENST00000582242 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
CDH8-207ENST00000582242 HERC2O95714 4834 aa3.48□□□□□ -1.85
CDH8-207ENST00000582242 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
CDH8-207ENST00000582242 TNP1P09430 55 aa3.46□□□□□ -1.86
CDH8-207ENST00000582242 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
CDH8-207ENST00000582242 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
CDH8-207ENST00000582242 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
CDH8-207ENST00000582242 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
CDH8-207ENST00000582242 M0R2T5 61 aa3.39□□□□□ -1.87
CDH8-207ENST00000582242 HERC1Q15751 4861 aa3.39□□□□□ -1.87
CDH8-207ENST00000582242 MT1HP80294 61 aa3.34□□□□□ -1.87
CDH8-207ENST00000582242 MT2AP02795 61 aa3.29□□□□□ -1.88
CDH8-207ENST00000582242 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
CDH8-207ENST00000582242 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
CDH8-207ENST00000582242 MT1FP04733 61 aa3.26□□□□□ -1.89
CDH8-207ENST00000582242 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
CDH8-207ENST00000582242 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CDH8-207ENST00000582242 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
CDH8-207ENST00000582242 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
CDH8-207ENST00000582242 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
CDH8-207ENST00000582242 MT1BP07438 61 aa3.17□□□□□ -1.9
CDH8-207ENST00000582242 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
CDH8-207ENST00000582242 MT1XP80297 61 aa3.13□□□□□ -1.91
CDH8-207ENST00000582242 MUC2Q02817 5179 aa3.13□□□□□ -1.91
CDH8-207ENST00000582242 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
CDH8-207ENST00000582242 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
CDH8-207ENST00000582242 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
CDH8-207ENST00000582242 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
CDH8-207ENST00000582242 INE1O15225 51 aa2.91□□□□□ -1.94
CDH8-207ENST00000582242 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
CDH8-207ENST00000582242 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CDH8-207ENST00000582242 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
CDH8-207ENST00000582242 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
CDH8-207ENST00000582242 MT1EP04732 61 aa2.74□□□□□ -1.97
CDH8-207ENST00000582242 MT1LQ93083 61 aa2.73□□□□□ -1.97
CDH8-207ENST00000582242 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
CDH8-207ENST00000582242 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
CDH8-207ENST00000582242 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
CDH8-207ENST00000582242 USH2AO75445 5202 aa2.66□□□□□ -1.98
CDH8-207ENST00000582242 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
CDH8-207ENST00000582242 MT1GP13640 62 aa2.6□□□□□ -1.99
CDH8-207ENST00000582242 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
CDH8-207ENST00000582242 MT1MQ8N339 61 aa2.56□□□□□ -2
CDH8-207ENST00000582242 KMT2DO14686 5537 aa2.53□□□□□ -2
CDH8-207ENST00000582242 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
CDH8-207ENST00000582242 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
CDH8-207ENST00000582242 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CDH8-207ENST00000582242 MT1AP04731 61 aa2.34□□□□□ -2.03
CDH8-207ENST00000582242 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
CDH8-207ENST00000582242 SPRR2EP22531 72 aa2.28□□□□□ -2.04
CDH8-207ENST00000582242 SPRR2BP35325 72 aa2.28□□□□□ -2.04
CDH8-207ENST00000582242 SPRR2AP35326 72 aa2.28□□□□□ -2.04
CDH8-207ENST00000582242 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
CDH8-207ENST00000582242 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
CDH8-207ENST00000582242 SPRR2DP22532 72 aa2.19□□□□□ -2.06
CDH8-207ENST00000582242 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
CDH8-207ENST00000582242 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
CDH8-207ENST00000582242 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
CDH8-207ENST00000582242 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
CDH8-207ENST00000582242 PRM1P04553 51 aa2.05□□□□□ -2.08
CDH8-207ENST00000582242 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
CDH8-207ENST00000582242 NEBP20929 6669 aa2.03□□□□□ -2.08
CDH8-207ENST00000582242 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
CDH8-207ENST00000582242 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
CDH8-207ENST00000582242 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CDH8-207ENST00000582242 MT4P47944 62 aa1.86□□□□□ -2.11
CDH8-207ENST00000582242 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
CDH8-207ENST00000582242 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
CDH8-207ENST00000582242 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
CDH8-207ENST00000582242 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
CDH8-207ENST00000582242 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
CDH8-207ENST00000582242 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
CDH8-207ENST00000582242 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
CDH8-207ENST00000582242 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
CDH8-207ENST00000582242 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CDH8-207ENST00000582242 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 53.3 ms