RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
TRAPPC8-207ENST00000580104 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
TRAPPC8-207ENST00000580104 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
TRAPPC8-207ENST00000580104 KMT2DO14686 5537 aa4.31□□□□□ -1.72
TRAPPC8-207ENST00000580104 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
TRAPPC8-207ENST00000580104 USH2AO75445 5202 aa4.28□□□□□ -1.72
TRAPPC8-207ENST00000580104 MT1MQ8N339 61 aa4.24□□□□□ -1.73
TRAPPC8-207ENST00000580104 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC8-207ENST00000580104 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
TRAPPC8-207ENST00000580104 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
TRAPPC8-207ENST00000580104 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
TRAPPC8-207ENST00000580104 SPRR2EP22531 72 aa4.23□□□□□ -1.73
TRAPPC8-207ENST00000580104 SPRR2BP35325 72 aa4.23□□□□□ -1.73
TRAPPC8-207ENST00000580104 SPRR2AP35326 72 aa4.23□□□□□ -1.73
TRAPPC8-207ENST00000580104 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
TRAPPC8-207ENST00000580104 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TRAPPC8-207ENST00000580104 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC8-207ENST00000580104 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
TRAPPC8-207ENST00000580104 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
TRAPPC8-207ENST00000580104 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
TRAPPC8-207ENST00000580104 PRM1P04553 51 aa4.07□□□□□ -1.76
TRAPPC8-207ENST00000580104 SPRR2DP22532 72 aa4.05□□□□□ -1.76
TRAPPC8-207ENST00000580104 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
TRAPPC8-207ENST00000580104 LCE2DQ5TA82 110 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC8-207ENST00000580104 MT1AP04731 61 aa3.86□□□□□ -1.79
TRAPPC8-207ENST00000580104 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
TRAPPC8-207ENST00000580104 MT3P25713 68 aa3.84□□□□□ -1.8
TRAPPC8-207ENST00000580104 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
TRAPPC8-207ENST00000580104 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TRAPPC8-207ENST00000580104 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
TRAPPC8-207ENST00000580104 MT4P47944 62 aa3.71□□□□□ -1.81
TRAPPC8-207ENST00000580104 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
TRAPPC8-207ENST00000580104 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
TRAPPC8-207ENST00000580104 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
TRAPPC8-207ENST00000580104 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
TRAPPC8-207ENST00000580104 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.84
TRAPPC8-207ENST00000580104 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
TRAPPC8-207ENST00000580104 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
TRAPPC8-207ENST00000580104 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
TRAPPC8-207ENST00000580104 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
TRAPPC8-207ENST00000580104 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
TRAPPC8-207ENST00000580104 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC8-207ENST00000580104 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC8-207ENST00000580104 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
TRAPPC8-207ENST00000580104 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
TRAPPC8-207ENST00000580104 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
TRAPPC8-207ENST00000580104 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
TRAPPC8-207ENST00000580104 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
TRAPPC8-207ENST00000580104 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
TRAPPC8-207ENST00000580104 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
TRAPPC8-207ENST00000580104 NEBP20929 6669 aa2.95□□□□□ -1.94
TRAPPC8-207ENST00000580104 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
TRAPPC8-207ENST00000580104 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
TRAPPC8-207ENST00000580104 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
TRAPPC8-207ENST00000580104 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
TRAPPC8-207ENST00000580104 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
TRAPPC8-207ENST00000580104 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TRAPPC8-207ENST00000580104 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
TRAPPC8-207ENST00000580104 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
TRAPPC8-207ENST00000580104 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -2
TRAPPC8-207ENST00000580104 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
TRAPPC8-207ENST00000580104 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
TRAPPC8-207ENST00000580104 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
TRAPPC8-207ENST00000580104 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
TRAPPC8-207ENST00000580104 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
TRAPPC8-207ENST00000580104 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
TRAPPC8-207ENST00000580104 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
TRAPPC8-207ENST00000580104 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
TRAPPC8-207ENST00000580104 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
TRAPPC8-207ENST00000580104 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
TRAPPC8-207ENST00000580104 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC8-207ENST00000580104 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
TRAPPC8-207ENST00000580104 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TRAPPC8-207ENST00000580104 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC8-207ENST00000580104 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
TRAPPC8-207ENST00000580104 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
TRAPPC8-207ENST00000580104 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
TRAPPC8-207ENST00000580104 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 61.8 ms