RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RYR3Q15413 4870 aa2.24□□□□□ -2.05
CDH8-206ENST00000580044 LPAP08519 4548 aa2.23□□□□□ -2.05
CDH8-206ENST00000580044 M0R2T5 61 aa2.17□□□□□ -2.06
CDH8-206ENST00000580044 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.06
CDH8-206ENST00000580044 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
CDH8-206ENST00000580044 INE1O15225 51 aa2.14□□□□□ -2.07
CDH8-206ENST00000580044 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
CDH8-206ENST00000580044 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
CDH8-206ENST00000580044 MT2AP02795 61 aa2.12□□□□□ -2.07
CDH8-206ENST00000580044 MT1HP80294 61 aa2.12□□□□□ -2.07
CDH8-206ENST00000580044 EPPK1P58107 5090 aaKnown RBP2.11□□□□□ -2.07
CDH8-206ENST00000580044 MT1FP04733 61 aa2.1□□□□□ -2.07
CDH8-206ENST00000580044 PRO2289Q9P1D8 64 aa2.1□□□□□ -2.07
CDH8-206ENST00000580044 BIRC6Q9NR09 4857 aa2.08□□□□□ -2.08
CDH8-206ENST00000580044 FLGP20930 4061 aaPredicted RBP2.08□□□□□ -2.08
CDH8-206ENST00000580044 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
CDH8-206ENST00000580044 HERC1Q15751 4861 aa2.06□□□□□ -2.08
CDH8-206ENST00000580044 MT1XP80297 61 aa2.06□□□□□ -2.08
CDH8-206ENST00000580044 MT1BP07438 61 aa2.05□□□□□ -2.08
CDH8-206ENST00000580044 HERC2O95714 4834 aa2.01□□□□□ -2.09
CDH8-206ENST00000580044 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
CDH8-206ENST00000580044 MUC2Q02817 5179 aa1.96□□□□□ -2.1
CDH8-206ENST00000580044 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
CDH8-206ENST00000580044 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
CDH8-206ENST00000580044 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
CDH8-206ENST00000580044 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CDH8-206ENST00000580044 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
CDH8-206ENST00000580044 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
CDH8-206ENST00000580044 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
CDH8-206ENST00000580044 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
CDH8-206ENST00000580044 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
CDH8-206ENST00000580044 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
CDH8-206ENST00000580044 MT1LQ93083 61 aa1.81□□□□□ -2.12
CDH8-206ENST00000580044 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
CDH8-206ENST00000580044 UBR4Q5T4S7 5183 aa1.8□□□□□ -2.12
CDH8-206ENST00000580044 MT1EP04732 61 aa1.79□□□□□ -2.12
CDH8-206ENST00000580044 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
CDH8-206ENST00000580044 KRTAP19-6Q3LI70 58 aa1.73□□□□□ -2.13
CDH8-206ENST00000580044 MT1GP13640 62 aa1.7□□□□□ -2.14
CDH8-206ENST00000580044 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
CDH8-206ENST00000580044 MT1MQ8N339 61 aa1.67□□□□□ -2.14
CDH8-206ENST00000580044 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
CDH8-206ENST00000580044 MT1AP04731 61 aa1.61□□□□□ -2.15
CDH8-206ENST00000580044 USH2AO75445 5202 aa1.59□□□□□ -2.15
CDH8-206ENST00000580044 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
CDH8-206ENST00000580044 SSPOA2VEC9 5147 aa1.59□□□□□ -2.15
CDH8-206ENST00000580044 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
CDH8-206ENST00000580044 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
CDH8-206ENST00000580044 KMT2DO14686 5537 aa1.55□□□□□ -2.16
CDH8-206ENST00000580044 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
CDH8-206ENST00000580044 PRM1P04553 51 aa1.44□□□□□ -2.18
CDH8-206ENST00000580044 SPRR2EP22531 72 aa1.41□□□□□ -2.18
CDH8-206ENST00000580044 SPRR2BP35325 72 aa1.41□□□□□ -2.18
CDH8-206ENST00000580044 SPRR2AP35326 72 aa1.41□□□□□ -2.18
CDH8-206ENST00000580044 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
CDH8-206ENST00000580044 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
CDH8-206ENST00000580044 SPRR2DP22532 72 aa1.36□□□□□ -2.19
CDH8-206ENST00000580044 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
CDH8-206ENST00000580044 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
CDH8-206ENST00000580044 FSIP2Q5CZC0 6907 aa1.34□□□□□ -2.19
CDH8-206ENST00000580044 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
CDH8-206ENST00000580044 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
CDH8-206ENST00000580044 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
CDH8-206ENST00000580044 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.21
CDH8-206ENST00000580044 KRTAP20-2Q3LI61 65 aa1.18□□□□□ -2.22
CDH8-206ENST00000580044 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
CDH8-206ENST00000580044 MT4P47944 62 aa1.14□□□□□ -2.23
CDH8-206ENST00000580044 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
CDH8-206ENST00000580044 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CDH8-206ENST00000580044 NEBP20929 6669 aa1.01□□□□□ -2.25
CDH8-206ENST00000580044 MUC5ACP98088 5654 aa1□□□□□ -2.25
CDH8-206ENST00000580044 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
CDH8-206ENST00000580044 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
CDH8-206ENST00000580044 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
CDH8-206ENST00000580044 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
CDH8-206ENST00000580044 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CDH8-206ENST00000580044 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
CDH8-206ENST00000580044 GPR98Q8WXG9 6306 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49.3 ms