RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
CDH8-206ENST00000580044 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
CDH8-206ENST00000580044 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
CDH8-206ENST00000580044 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
CDH8-206ENST00000580044 FOXD1Q16676 465 aa16.68■□□□□ 0.26
CDH8-206ENST00000580044 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
CDH8-206ENST00000580044 MSH5O43196 834 aa15.8■□□□□ 0.12
CDH8-206ENST00000580044 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
CDH8-206ENST00000580044 ADRA2BP18089 450 aa15.58■□□□□ 0.08
CDH8-206ENST00000580044 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
CDH8-206ENST00000580044 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
CDH8-206ENST00000580044 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
CDH8-206ENST00000580044 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
CDH8-206ENST00000580044 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
CDH8-206ENST00000580044 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
CDH8-206ENST00000580044 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
CDH8-206ENST00000580044 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
CDH8-206ENST00000580044 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
CDH8-206ENST00000580044 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
CDH8-206ENST00000580044 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
CDH8-206ENST00000580044 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
CDH8-206ENST00000580044 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
CDH8-206ENST00000580044 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
CDH8-206ENST00000580044 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
CDH8-206ENST00000580044 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
CDH8-206ENST00000580044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDH8-206ENST00000580044 KCNA4P22459 653 aa13.04□□□□□ -0.32
CDH8-206ENST00000580044 APLP2Q06481 763 aa12.77□□□□□ -0.37
CDH8-206ENST00000580044 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
CDH8-206ENST00000580044 CAPN15O75808 1086 aa12.74□□□□□ -0.37
CDH8-206ENST00000580044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.7□□□□□ -0.38
CDH8-206ENST00000580044 HNRNPUL2Q1KMD3 747 aaKnown RBP12.7□□□□□ -0.38
CDH8-206ENST00000580044 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
CDH8-206ENST00000580044 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
CDH8-206ENST00000580044 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
CDH8-206ENST00000580044 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
CDH8-206ENST00000580044 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
CDH8-206ENST00000580044 DSG3P32926 999 aa12.5□□□□□ -0.41
CDH8-206ENST00000580044 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
CDH8-206ENST00000580044 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
CDH8-206ENST00000580044 ABCB7O75027 752 aa12.35□□□□□ -0.43
CDH8-206ENST00000580044 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
CDH8-206ENST00000580044 POLA2Q14181 598 aa12.15□□□□□ -0.46
CDH8-206ENST00000580044 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
CDH8-206ENST00000580044 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
CDH8-206ENST00000580044 POTEHQ6S545 545 aa11.98□□□□□ -0.49
CDH8-206ENST00000580044 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
CDH8-206ENST00000580044 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
CDH8-206ENST00000580044 ZBTB22O15209 634 aa11.87□□□□□ -0.51
CDH8-206ENST00000580044 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
CDH8-206ENST00000580044 FBLN2P98095 1184 aa11.77□□□□□ -0.53
CDH8-206ENST00000580044 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
CDH8-206ENST00000580044 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
CDH8-206ENST00000580044 REM2Q8IYK8 340 aaPredicted RBP11.6□□□□□ -0.55
CDH8-206ENST00000580044 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
CDH8-206ENST00000580044 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
CDH8-206ENST00000580044 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
CDH8-206ENST00000580044 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
CDH8-206ENST00000580044 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
CDH8-206ENST00000580044 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
CDH8-206ENST00000580044 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
CDH8-206ENST00000580044 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
CDH8-206ENST00000580044 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
CDH8-206ENST00000580044 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
CDH8-206ENST00000580044 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
CDH8-206ENST00000580044 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH8-206ENST00000580044 HAX1O00165 279 aa11.33□□□□□ -0.6
CDH8-206ENST00000580044 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
CDH8-206ENST00000580044 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
CDH8-206ENST00000580044 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH8-206ENST00000580044 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
CDH8-206ENST00000580044 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
CDH8-206ENST00000580044 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
CDH8-206ENST00000580044 SPDYE4A6NLX3 237 aa11.04□□□□□ -0.64
CDH8-206ENST00000580044 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
CDH8-206ENST00000580044 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
CDH8-206ENST00000580044 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
CDH8-206ENST00000580044 EVX2Q03828 476 aa10.92□□□□□ -0.66
CDH8-206ENST00000580044 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
CDH8-206ENST00000580044 CLCN6P51797 869 aa10.88□□□□□ -0.67
CDH8-206ENST00000580044 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
CDH8-206ENST00000580044 GABBR2O75899 941 aa10.83□□□□□ -0.68
CDH8-206ENST00000580044 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDH8-206ENST00000580044 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
CDH8-206ENST00000580044 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
CDH8-206ENST00000580044 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
CDH8-206ENST00000580044 DCBLD2Q96PD2 775 aa10.71□□□□□ -0.69
CDH8-206ENST00000580044 NISCHQ9Y2I1 1504 aa10.7□□□□□ -0.7
CDH8-206ENST00000580044 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
CDH8-206ENST00000580044 MIER1Q8N108 512 aa10.62□□□□□ -0.71
CDH8-206ENST00000580044 PROM2Q8N271 834 aa10.61□□□□□ -0.71
CDH8-206ENST00000580044 LHX8Q68G74 356 aa10.59□□□□□ -0.71
CDH8-206ENST00000580044 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
CDH8-206ENST00000580044 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
CDH8-206ENST00000580044 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
CDH8-206ENST00000580044 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
CDH8-206ENST00000580044 FKBP8Q14318 412 aa10.5□□□□□ -0.73
CDH8-206ENST00000580044 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
CDH8-206ENST00000580044 GALR2O43603 387 aaPredicted RBP10.49□□□□□ -0.73
CDH8-206ENST00000580044 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms