RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 KRTAP4-11Q9BYQ6 195 aa1.66□□□□□ -2.14
NF1-218ENST00000577967 LCE3BQ5TA77 95 aa1.64□□□□□ -2.15
NF1-218ENST00000577967 MT1GP13640 62 aa1.64□□□□□ -2.15
NF1-218ENST00000577967 SPRR2DP22532 72 aa1.62□□□□□ -2.15
NF1-218ENST00000577967 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
NF1-218ENST00000577967 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
NF1-218ENST00000577967 RNF213Q63HN8 5207 aa1.59□□□□□ -2.16
NF1-218ENST00000577967 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
NF1-218ENST00000577967 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
NF1-218ENST00000577967 MT1EP04732 61 aa1.57□□□□□ -2.16
NF1-218ENST00000577967 MT1LQ93083 61 aa1.57□□□□□ -2.16
NF1-218ENST00000577967 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
NF1-218ENST00000577967 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
NF1-218ENST00000577967 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
NF1-218ENST00000577967 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
NF1-218ENST00000577967 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
NF1-218ENST00000577967 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
NF1-218ENST00000577967 MUC2Q02817 5179 aa1.53□□□□□ -2.17
NF1-218ENST00000577967 MT1MQ8N339 61 aa1.51□□□□□ -2.17
NF1-218ENST00000577967 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
NF1-218ENST00000577967 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
NF1-218ENST00000577967 MT4P47944 62 aa1.45□□□□□ -2.18
NF1-218ENST00000577967 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
NF1-218ENST00000577967 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
NF1-218ENST00000577967 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
NF1-218ENST00000577967 LCE3EQ5T5B0 92 aa1.38□□□□□ -2.19
NF1-218ENST00000577967 KRTAP9-6A8MVA2 160 aa1.37□□□□□ -2.19
NF1-218ENST00000577967 KRTAP6-3Q3LI67 103 aa1.37□□□□□ -2.19
NF1-218ENST00000577967 FSIP2Q5CZC0 6907 aa1.37□□□□□ -2.19
NF1-218ENST00000577967 KRTAP9-7A8MTY7 169 aa1.37□□□□□ -2.19
NF1-218ENST00000577967 LCE5AQ5TCM9 118 aa1.36□□□□□ -2.19
NF1-218ENST00000577967 MT1AP04731 61 aa1.35□□□□□ -2.19
NF1-218ENST00000577967 LCE1AQ5T7P2 110 aa1.35□□□□□ -2.19
NF1-218ENST00000577967 MT3P25713 68 aa1.35□□□□□ -2.19
NF1-218ENST00000577967 KRTAP5-9P26371 169 aa1.35□□□□□ -2.19
NF1-218ENST00000577967 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
NF1-218ENST00000577967 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
NF1-218ENST00000577967 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
NF1-218ENST00000577967 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
NF1-218ENST00000577967 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
NF1-218ENST00000577967 LCE4AQ5TA78 99 aa1.34□□□□□ -2.19
NF1-218ENST00000577967 KMT2DO14686 5537 aa1.33□□□□□ -2.2
NF1-218ENST00000577967 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
NF1-218ENST00000577967 USH2AO75445 5202 aa1.32□□□□□ -2.2
NF1-218ENST00000577967 PRM1P04553 51 aa1.3□□□□□ -2.2
NF1-218ENST00000577967 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
NF1-218ENST00000577967 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
NF1-218ENST00000577967 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
NF1-218ENST00000577967 SSPOA2VEC9 5147 aa1.28□□□□□ -2.21
NF1-218ENST00000577967 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
NF1-218ENST00000577967 KRTAP2-2Q9BYT5 123 aa1.25□□□□□ -2.21
NF1-218ENST00000577967 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
NF1-218ENST00000577967 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
NF1-218ENST00000577967 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
NF1-218ENST00000577967 NEBP20929 6669 aa1.21□□□□□ -2.22
NF1-218ENST00000577967 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
NF1-218ENST00000577967 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.22
NF1-218ENST00000577967 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
NF1-218ENST00000577967 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
NF1-218ENST00000577967 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
NF1-218ENST00000577967 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
NF1-218ENST00000577967 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
NF1-218ENST00000577967 KRTAP5-8O75690 187 aa1.05□□□□□ -2.24
NF1-218ENST00000577967 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
NF1-218ENST00000577967 LCE1EQ5T753 118 aa1.05□□□□□ -2.24
NF1-218ENST00000577967 LCE1FQ5T754 118 aa1.05□□□□□ -2.24
NF1-218ENST00000577967 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
NF1-218ENST00000577967 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
NF1-218ENST00000577967 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
NF1-218ENST00000577967 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
NF1-218ENST00000577967 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
NF1-218ENST00000577967 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
NF1-218ENST00000577967 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
NF1-218ENST00000577967 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
NF1-218ENST00000577967 KRTAP5-7Q6L8G8 165 aa0.66□□□□□ -2.3
NF1-218ENST00000577967 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
NF1-218ENST00000577967 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
NF1-218ENST00000577967 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 48.1 ms