RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
TFAP4-206ENST00000575320 MT1EP04732 61 aa4.35□□□□□ -1.71
TFAP4-206ENST00000575320 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
TFAP4-206ENST00000575320 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
TFAP4-206ENST00000575320 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
TFAP4-206ENST00000575320 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
TFAP4-206ENST00000575320 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
TFAP4-206ENST00000575320 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
TFAP4-206ENST00000575320 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
TFAP4-206ENST00000575320 MT1MQ8N339 61 aa4.28□□□□□ -1.72
TFAP4-206ENST00000575320 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
TFAP4-206ENST00000575320 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
TFAP4-206ENST00000575320 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
TFAP4-206ENST00000575320 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
TFAP4-206ENST00000575320 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
TFAP4-206ENST00000575320 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
TFAP4-206ENST00000575320 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
TFAP4-206ENST00000575320 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
TFAP4-206ENST00000575320 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
TFAP4-206ENST00000575320 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
TFAP4-206ENST00000575320 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
TFAP4-206ENST00000575320 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
TFAP4-206ENST00000575320 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
TFAP4-206ENST00000575320 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
TFAP4-206ENST00000575320 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
TFAP4-206ENST00000575320 MT1AP04731 61 aa3.98□□□□□ -1.77
TFAP4-206ENST00000575320 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
TFAP4-206ENST00000575320 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
TFAP4-206ENST00000575320 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TFAP4-206ENST00000575320 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
TFAP4-206ENST00000575320 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.79
TFAP4-206ENST00000575320 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
TFAP4-206ENST00000575320 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
TFAP4-206ENST00000575320 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
TFAP4-206ENST00000575320 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
TFAP4-206ENST00000575320 MUC2Q02817 5179 aa3.78□□□□□ -1.8
TFAP4-206ENST00000575320 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TFAP4-206ENST00000575320 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
TFAP4-206ENST00000575320 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TFAP4-206ENST00000575320 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
TFAP4-206ENST00000575320 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
TFAP4-206ENST00000575320 KMT2DO14686 5537 aa3.53□□□□□ -1.84
TFAP4-206ENST00000575320 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
TFAP4-206ENST00000575320 NEBP20929 6669 aa3.41□□□□□ -1.86
TFAP4-206ENST00000575320 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.87
TFAP4-206ENST00000575320 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
TFAP4-206ENST00000575320 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
TFAP4-206ENST00000575320 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
TFAP4-206ENST00000575320 USH2AO75445 5202 aa3.25□□□□□ -1.89
TFAP4-206ENST00000575320 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
TFAP4-206ENST00000575320 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
TFAP4-206ENST00000575320 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
TFAP4-206ENST00000575320 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
TFAP4-206ENST00000575320 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
TFAP4-206ENST00000575320 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
TFAP4-206ENST00000575320 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
TFAP4-206ENST00000575320 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
TFAP4-206ENST00000575320 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
TFAP4-206ENST00000575320 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
TFAP4-206ENST00000575320 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
TFAP4-206ENST00000575320 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
TFAP4-206ENST00000575320 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
TFAP4-206ENST00000575320 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
TFAP4-206ENST00000575320 PHGR1C9JFL3 82 aa2.54□□□□□ -2
TFAP4-206ENST00000575320 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
TFAP4-206ENST00000575320 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
TFAP4-206ENST00000575320 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
TFAP4-206ENST00000575320 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
TFAP4-206ENST00000575320 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
TFAP4-206ENST00000575320 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
TFAP4-206ENST00000575320 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
TFAP4-206ENST00000575320 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
TFAP4-206ENST00000575320 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
TFAP4-206ENST00000575320 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
TFAP4-206ENST00000575320 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
TFAP4-206ENST00000575320 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TFAP4-206ENST00000575320 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
TFAP4-206ENST00000575320 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 85.9 ms