RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
TFAP4-206ENST00000575320 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
TFAP4-206ENST00000575320 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
TFAP4-206ENST00000575320 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
TFAP4-206ENST00000575320 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
TFAP4-206ENST00000575320 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
TFAP4-206ENST00000575320 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
TFAP4-206ENST00000575320 APLP2Q06481 763 aa21.66■■□□□ 1.06
TFAP4-206ENST00000575320 ERICH6Q7L0X2 663 aa21.61■■□□□ 1.05
TFAP4-206ENST00000575320 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
TFAP4-206ENST00000575320 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
TFAP4-206ENST00000575320 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
TFAP4-206ENST00000575320 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
TFAP4-206ENST00000575320 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
TFAP4-206ENST00000575320 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
TFAP4-206ENST00000575320 MYT1Q01538 1121 aa21.17■□□□□ 0.98
TFAP4-206ENST00000575320 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
TFAP4-206ENST00000575320 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
TFAP4-206ENST00000575320 NEFLP07196 543 aa20.98■□□□□ 0.95
TFAP4-206ENST00000575320 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
TFAP4-206ENST00000575320 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
TFAP4-206ENST00000575320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
TFAP4-206ENST00000575320 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
TFAP4-206ENST00000575320 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
TFAP4-206ENST00000575320 DAXXQ9UER7 740 aaPredicted RBP20.51■□□□□ 0.87
TFAP4-206ENST00000575320 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
TFAP4-206ENST00000575320 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
TFAP4-206ENST00000575320 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
TFAP4-206ENST00000575320 HRCP23327 699 aa20.35■□□□□ 0.85
TFAP4-206ENST00000575320 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
TFAP4-206ENST00000575320 ITGAEP38570 1179 aa20.15■□□□□ 0.82
TFAP4-206ENST00000575320 ABCC9O60706 1549 aa20.14■□□□□ 0.81
TFAP4-206ENST00000575320 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
TFAP4-206ENST00000575320 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
TFAP4-206ENST00000575320 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
TFAP4-206ENST00000575320 SLC4A1APQ9BWU0 796 aaKnown RBP20.07■□□□□ 0.8
TFAP4-206ENST00000575320 FBLN2P98095 1184 aa20.07■□□□□ 0.8
TFAP4-206ENST00000575320 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
TFAP4-206ENST00000575320 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
TFAP4-206ENST00000575320 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
TFAP4-206ENST00000575320 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
TFAP4-206ENST00000575320 BCANQ96GW7 911 aa19.87■□□□□ 0.77
TFAP4-206ENST00000575320 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
TFAP4-206ENST00000575320 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
TFAP4-206ENST00000575320 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
TFAP4-206ENST00000575320 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
TFAP4-206ENST00000575320 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
TFAP4-206ENST00000575320 FAM50AQ14320 339 aaKnown RBP19.54■□□□□ 0.72
TFAP4-206ENST00000575320 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
TFAP4-206ENST00000575320 SLC24A1O60721 1099 aa19.5■□□□□ 0.71
TFAP4-206ENST00000575320 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
TFAP4-206ENST00000575320 ANP32CO43423 234 aa19.48■□□□□ 0.71
TFAP4-206ENST00000575320 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
TFAP4-206ENST00000575320 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
TFAP4-206ENST00000575320 ZNF326Q5BKZ1 582 aaKnown RBP19.32■□□□□ 0.68
TFAP4-206ENST00000575320 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
TFAP4-206ENST00000575320 ANP32AP39687 249 aaKnown RBP19.32■□□□□ 0.68
TFAP4-206ENST00000575320 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
TFAP4-206ENST00000575320 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
TFAP4-206ENST00000575320 ARID3CA6NKF2 412 aa19.3■□□□□ 0.68
TFAP4-206ENST00000575320 NEFMP07197 916 aa19.25■□□□□ 0.67
TFAP4-206ENST00000575320 EIF5BO60841 1220 aaKnown RBP19.25■□□□□ 0.67
TFAP4-206ENST00000575320 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
TFAP4-206ENST00000575320 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
TFAP4-206ENST00000575320 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
TFAP4-206ENST00000575320 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
TFAP4-206ENST00000575320 ANP32BQ92688 251 aaKnown RBP19.09■□□□□ 0.65
TFAP4-206ENST00000575320 P3H3Q8IVL6 736 aa19.08■□□□□ 0.65
TFAP4-206ENST00000575320 FKBP8Q14318 412 aa19.07■□□□□ 0.64
TFAP4-206ENST00000575320 A0A0G2JS52 829 aa19.06■□□□□ 0.64
TFAP4-206ENST00000575320 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
TFAP4-206ENST00000575320 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.63
TFAP4-206ENST00000575320 ARID4BQ4LE39 1312 aaPredicted RBP19.01■□□□□ 0.63
TFAP4-206ENST00000575320 GLIPR1L2Q4G1C9 344 aa19.01■□□□□ 0.63
TFAP4-206ENST00000575320 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
TFAP4-206ENST00000575320 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
TFAP4-206ENST00000575320 NBR1Q14596 966 aa18.93■□□□□ 0.62
TFAP4-206ENST00000575320 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
TFAP4-206ENST00000575320 UPF2Q9HAU5 1272 aaKnown RBP18.9■□□□□ 0.62
TFAP4-206ENST00000575320 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
TFAP4-206ENST00000575320 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
TFAP4-206ENST00000575320 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
TFAP4-206ENST00000575320 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
TFAP4-206ENST00000575320 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
TFAP4-206ENST00000575320 ARXQ96QS3 562 aa18.81■□□□□ 0.6
TFAP4-206ENST00000575320 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
TFAP4-206ENST00000575320 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
TFAP4-206ENST00000575320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
TFAP4-206ENST00000575320 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
TFAP4-206ENST00000575320 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
TFAP4-206ENST00000575320 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
TFAP4-206ENST00000575320 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
TFAP4-206ENST00000575320 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
TFAP4-206ENST00000575320 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
TFAP4-206ENST00000575320 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.66■□□□□ 0.58
TFAP4-206ENST00000575320 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
TFAP4-206ENST00000575320 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
TFAP4-206ENST00000575320 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
TFAP4-206ENST00000575320 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
TFAP4-206ENST00000575320 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms