RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
TSR1-203ENST00000575049 TNP1P09430 55 aa1.77□□□□□ -2.13
TSR1-203ENST00000575049 RYR1P21817 5038 aa1.76□□□□□ -2.13
TSR1-203ENST00000575049 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
TSR1-203ENST00000575049 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
TSR1-203ENST00000575049 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
TSR1-203ENST00000575049 RYR3Q15413 4870 aa1.73□□□□□ -2.13
TSR1-203ENST00000575049 RYR2Q92736 4967 aa1.73□□□□□ -2.13
TSR1-203ENST00000575049 KRTAP4-1Q9BYQ7 146 aa1.71□□□□□ -2.14
TSR1-203ENST00000575049 HERC1Q15751 4861 aa1.69□□□□□ -2.14
TSR1-203ENST00000575049 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
TSR1-203ENST00000575049 LRP2P98164 4655 aa1.66□□□□□ -2.14
TSR1-203ENST00000575049 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
TSR1-203ENST00000575049 KMT2CQ8NEZ4 4911 aaKnown RBP1.65□□□□□ -2.15
TSR1-203ENST00000575049 LPAP08519 4548 aa1.65□□□□□ -2.15
TSR1-203ENST00000575049 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
TSR1-203ENST00000575049 EPPK1P58107 5090 aaKnown RBP1.63□□□□□ -2.15
TSR1-203ENST00000575049 MUC2Q02817 5179 aa1.62□□□□□ -2.15
TSR1-203ENST00000575049 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
TSR1-203ENST00000575049 KRTAP19-8Q3LI54 63 aa1.58□□□□□ -2.16
TSR1-203ENST00000575049 HERC2O95714 4834 aa1.54□□□□□ -2.16
TSR1-203ENST00000575049 ABCA13Q86UQ4 5058 aa1.54□□□□□ -2.16
TSR1-203ENST00000575049 FLGP20930 4061 aaPredicted RBP1.54□□□□□ -2.16
TSR1-203ENST00000575049 MT2AP02795 61 aa1.53□□□□□ -2.16
TSR1-203ENST00000575049 MT1XP80297 61 aa1.53□□□□□ -2.16
TSR1-203ENST00000575049 MT1FP04733 61 aa1.52□□□□□ -2.17
TSR1-203ENST00000575049 MT1BP07438 61 aa1.52□□□□□ -2.17
TSR1-203ENST00000575049 MT1HP80294 61 aa1.51□□□□□ -2.17
TSR1-203ENST00000575049 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
TSR1-203ENST00000575049 M0R2T5 61 aa1.48□□□□□ -2.17
TSR1-203ENST00000575049 KRTAP2-3P0C7H8 128 aa1.48□□□□□ -2.17
TSR1-203ENST00000575049 KRTAP2-4Q9BYR9 128 aa1.48□□□□□ -2.17
TSR1-203ENST00000575049 KRTAP2-1Q9BYU5 128 aa1.48□□□□□ -2.17
TSR1-203ENST00000575049 CRCT1Q9UGL9 99 aa1.47□□□□□ -2.17
TSR1-203ENST00000575049 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
TSR1-203ENST00000575049 KRTAP19-5Q3LI72 72 aa1.44□□□□□ -2.18
TSR1-203ENST00000575049 HMCN2Q8NDA2 5059 aa1.43□□□□□ -2.18
TSR1-203ENST00000575049 FAT4Q6V0I7 4981 aa1.42□□□□□ -2.18
TSR1-203ENST00000575049 NEBP20929 6669 aa1.39□□□□□ -2.19
TSR1-203ENST00000575049 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
TSR1-203ENST00000575049 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
TSR1-203ENST00000575049 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
TSR1-203ENST00000575049 MT1LQ93083 61 aa1.34□□□□□ -2.19
TSR1-203ENST00000575049 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
TSR1-203ENST00000575049 MT1EP04732 61 aa1.32□□□□□ -2.2
TSR1-203ENST00000575049 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
TSR1-203ENST00000575049 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
TSR1-203ENST00000575049 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
TSR1-203ENST00000575049 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
TSR1-203ENST00000575049 MT1AP04731 61 aa1.23□□□□□ -2.21
TSR1-203ENST00000575049 MT1GP13640 62 aa1.23□□□□□ -2.21
TSR1-203ENST00000575049 MT1MQ8N339 61 aa1.23□□□□□ -2.21
TSR1-203ENST00000575049 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
TSR1-203ENST00000575049 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
TSR1-203ENST00000575049 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
TSR1-203ENST00000575049 USH2AO75445 5202 aa1.17□□□□□ -2.22
TSR1-203ENST00000575049 KMT2DO14686 5537 aa1.16□□□□□ -2.22
TSR1-203ENST00000575049 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.22
TSR1-203ENST00000575049 PRM1P04553 51 aa1.15□□□□□ -2.23
TSR1-203ENST00000575049 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
TSR1-203ENST00000575049 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
TSR1-203ENST00000575049 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
TSR1-203ENST00000575049 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
TSR1-203ENST00000575049 SPRR2AP35326 72 aa1.04□□□□□ -2.24
TSR1-203ENST00000575049 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.24
TSR1-203ENST00000575049 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
TSR1-203ENST00000575049 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
TSR1-203ENST00000575049 HMCN1Q96RW7 5635 aa1.01□□□□□ -2.25
TSR1-203ENST00000575049 SPRR2EP22531 72 aa1.01□□□□□ -2.25
TSR1-203ENST00000575049 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
TSR1-203ENST00000575049 MUC5ACP98088 5654 aa1□□□□□ -2.25
TSR1-203ENST00000575049 SPRR2BP35325 72 aa0.99□□□□□ -2.25
TSR1-203ENST00000575049 SPRR2DP22532 72 aa0.95□□□□□ -2.26
TSR1-203ENST00000575049 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
TSR1-203ENST00000575049 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
TSR1-203ENST00000575049 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
TSR1-203ENST00000575049 MT4P47944 62 aa0.75□□□□□ -2.29
TSR1-203ENST00000575049 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 17.8 ms