RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LRP2P98164 4655 aa4.75□□□□□ -1.65
CACNA1A-202ENST00000573710 MT1EP04732 61 aa4.71□□□□□ -1.65
CACNA1A-202ENST00000573710 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
CACNA1A-202ENST00000573710 MT1MQ8N339 61 aa4.67□□□□□ -1.66
CACNA1A-202ENST00000573710 HYDINQ4G0P3 5121 aa4.66□□□□□ -1.66
CACNA1A-202ENST00000573710 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
CACNA1A-202ENST00000573710 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
CACNA1A-202ENST00000573710 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
CACNA1A-202ENST00000573710 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
CACNA1A-202ENST00000573710 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
CACNA1A-202ENST00000573710 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
CACNA1A-202ENST00000573710 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
CACNA1A-202ENST00000573710 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
CACNA1A-202ENST00000573710 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
CACNA1A-202ENST00000573710 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
CACNA1A-202ENST00000573710 MT1AP04731 61 aa4.25□□□□□ -1.73
CACNA1A-202ENST00000573710 HERC2O95714 4834 aa4.24□□□□□ -1.73
CACNA1A-202ENST00000573710 RYR2Q92736 4967 aa4.23□□□□□ -1.73
CACNA1A-202ENST00000573710 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
CACNA1A-202ENST00000573710 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
CACNA1A-202ENST00000573710 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CACNA1A-202ENST00000573710 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
CACNA1A-202ENST00000573710 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
CACNA1A-202ENST00000573710 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
CACNA1A-202ENST00000573710 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
CACNA1A-202ENST00000573710 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
CACNA1A-202ENST00000573710 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
CACNA1A-202ENST00000573710 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
CACNA1A-202ENST00000573710 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
CACNA1A-202ENST00000573710 HERC1Q15751 4861 aa4.02□□□□□ -1.77
CACNA1A-202ENST00000573710 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
CACNA1A-202ENST00000573710 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
CACNA1A-202ENST00000573710 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
CACNA1A-202ENST00000573710 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
CACNA1A-202ENST00000573710 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
CACNA1A-202ENST00000573710 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
CACNA1A-202ENST00000573710 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
CACNA1A-202ENST00000573710 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
CACNA1A-202ENST00000573710 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
CACNA1A-202ENST00000573710 MUC2Q02817 5179 aa3.73□□□□□ -1.81
CACNA1A-202ENST00000573710 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
CACNA1A-202ENST00000573710 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
CACNA1A-202ENST00000573710 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
CACNA1A-202ENST00000573710 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
CACNA1A-202ENST00000573710 KMT2DO14686 5537 aa3.57□□□□□ -1.84
CACNA1A-202ENST00000573710 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
CACNA1A-202ENST00000573710 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
CACNA1A-202ENST00000573710 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CACNA1A-202ENST00000573710 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
CACNA1A-202ENST00000573710 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
CACNA1A-202ENST00000573710 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CACNA1A-202ENST00000573710 NEBP20929 6669 aa3.06□□□□□ -1.92
CACNA1A-202ENST00000573710 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
CACNA1A-202ENST00000573710 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CACNA1A-202ENST00000573710 USH2AO75445 5202 aa2.99□□□□□ -1.93
CACNA1A-202ENST00000573710 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
CACNA1A-202ENST00000573710 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CACNA1A-202ENST00000573710 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
CACNA1A-202ENST00000573710 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
CACNA1A-202ENST00000573710 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
CACNA1A-202ENST00000573710 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
CACNA1A-202ENST00000573710 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CACNA1A-202ENST00000573710 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
CACNA1A-202ENST00000573710 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
CACNA1A-202ENST00000573710 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
CACNA1A-202ENST00000573710 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
CACNA1A-202ENST00000573710 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.06
CACNA1A-202ENST00000573710 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
CACNA1A-202ENST00000573710 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
CACNA1A-202ENST00000573710 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CACNA1A-202ENST00000573710 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CACNA1A-202ENST00000573710 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
CACNA1A-202ENST00000573710 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
CACNA1A-202ENST00000573710 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CACNA1A-202ENST00000573710 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
CACNA1A-202ENST00000573710 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CACNA1A-202ENST00000573710 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 213.8 ms