RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
CDC27-215ENST00000573550 KRTAP4-1Q9BYQ7 146 aa2.05□□□□□ -2.08
CDC27-215ENST00000573550 LPAP08519 4548 aa2.04□□□□□ -2.08
CDC27-215ENST00000573550 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
CDC27-215ENST00000573550 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
CDC27-215ENST00000573550 PLAC4Q8WY50 150 aa2.02□□□□□ -2.09
CDC27-215ENST00000573550 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
CDC27-215ENST00000573550 TNP1P09430 55 aa2□□□□□ -2.09
CDC27-215ENST00000573550 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
CDC27-215ENST00000573550 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
CDC27-215ENST00000573550 ABCA13Q86UQ4 5058 aa1.97□□□□□ -2.09
CDC27-215ENST00000573550 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
CDC27-215ENST00000573550 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
CDC27-215ENST00000573550 BIRC6Q9NR09 4857 aa1.96□□□□□ -2.1
CDC27-215ENST00000573550 HERC2O95714 4834 aa1.94□□□□□ -2.1
CDC27-215ENST00000573550 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
CDC27-215ENST00000573550 HERC1Q15751 4861 aa1.9□□□□□ -2.11
CDC27-215ENST00000573550 MT1HP80294 61 aa1.88□□□□□ -2.11
CDC27-215ENST00000573550 MT2AP02795 61 aa1.87□□□□□ -2.11
CDC27-215ENST00000573550 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
CDC27-215ENST00000573550 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
CDC27-215ENST00000573550 MT1FP04733 61 aa1.85□□□□□ -2.11
CDC27-215ENST00000573550 M0R2T5 61 aa1.84□□□□□ -2.11
CDC27-215ENST00000573550 MUC2Q02817 5179 aa1.82□□□□□ -2.12
CDC27-215ENST00000573550 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
CDC27-215ENST00000573550 MT1BP07438 61 aa1.81□□□□□ -2.12
CDC27-215ENST00000573550 MT1XP80297 61 aa1.81□□□□□ -2.12
CDC27-215ENST00000573550 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
CDC27-215ENST00000573550 INE1O15225 51 aa1.77□□□□□ -2.13
CDC27-215ENST00000573550 FAT4Q6V0I7 4981 aa1.75□□□□□ -2.13
CDC27-215ENST00000573550 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
CDC27-215ENST00000573550 UBR4Q5T4S7 5183 aa1.72□□□□□ -2.13
CDC27-215ENST00000573550 RNF213Q63HN8 5207 aa1.71□□□□□ -2.14
CDC27-215ENST00000573550 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
CDC27-215ENST00000573550 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
CDC27-215ENST00000573550 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
CDC27-215ENST00000573550 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
CDC27-215ENST00000573550 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
CDC27-215ENST00000573550 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
CDC27-215ENST00000573550 MT1EP04732 61 aa1.58□□□□□ -2.16
CDC27-215ENST00000573550 MT1LQ93083 61 aa1.58□□□□□ -2.16
CDC27-215ENST00000573550 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
CDC27-215ENST00000573550 FCGBPQ9Y6R7 5405 aaPredicted RBP1.52□□□□□ -2.17
CDC27-215ENST00000573550 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
CDC27-215ENST00000573550 MT1GP13640 62 aa1.49□□□□□ -2.17
CDC27-215ENST00000573550 USH2AO75445 5202 aa1.49□□□□□ -2.17
CDC27-215ENST00000573550 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
CDC27-215ENST00000573550 MT1MQ8N339 61 aa1.46□□□□□ -2.18
CDC27-215ENST00000573550 KMT2DO14686 5537 aa1.42□□□□□ -2.18
CDC27-215ENST00000573550 MT1AP04731 61 aa1.39□□□□□ -2.19
CDC27-215ENST00000573550 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
CDC27-215ENST00000573550 FSIP2Q5CZC0 6907 aa1.31□□□□□ -2.2
CDC27-215ENST00000573550 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
CDC27-215ENST00000573550 KRTAP6-1Q3LI64 71 aa1.29□□□□□ -2.2
CDC27-215ENST00000573550 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
CDC27-215ENST00000573550 SPRR2EP22531 72 aa1.23□□□□□ -2.21
CDC27-215ENST00000573550 SPRR2BP35325 72 aa1.23□□□□□ -2.21
CDC27-215ENST00000573550 SPRR2AP35326 72 aa1.23□□□□□ -2.21
CDC27-215ENST00000573550 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
CDC27-215ENST00000573550 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
CDC27-215ENST00000573550 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
CDC27-215ENST00000573550 PRM1P04553 51 aa1.19□□□□□ -2.22
CDC27-215ENST00000573550 SPRR2DP22532 72 aa1.19□□□□□ -2.22
CDC27-215ENST00000573550 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
CDC27-215ENST00000573550 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
CDC27-215ENST00000573550 NEBP20929 6669 aa1.12□□□□□ -2.23
CDC27-215ENST00000573550 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
CDC27-215ENST00000573550 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
CDC27-215ENST00000573550 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
CDC27-215ENST00000573550 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
CDC27-215ENST00000573550 MT4P47944 62 aa0.98□□□□□ -2.25
CDC27-215ENST00000573550 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
CDC27-215ENST00000573550 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
CDC27-215ENST00000573550 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
CDC27-215ENST00000573550 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
CDC27-215ENST00000573550 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
CDC27-215ENST00000573550 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
CDC27-215ENST00000573550 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms