RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 HYDINQ4G0P3 5121 aa2.87□□□□□ -1.95
USP6-204ENST00000572949 PCLOQ9Y6V0 5065 aa2.86□□□□□ -1.95
USP6-204ENST00000572949 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
USP6-204ENST00000572949 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
USP6-204ENST00000572949 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
USP6-204ENST00000572949 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
USP6-204ENST00000572949 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.96
USP6-204ENST00000572949 LPAP08519 4548 aa2.83□□□□□ -1.96
USP6-204ENST00000572949 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
USP6-204ENST00000572949 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
USP6-204ENST00000572949 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
USP6-204ENST00000572949 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
USP6-204ENST00000572949 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
USP6-204ENST00000572949 KMT2CQ8NEZ4 4911 aaKnown RBP2.76□□□□□ -1.97
USP6-204ENST00000572949 LRP2P98164 4655 aa2.75□□□□□ -1.97
USP6-204ENST00000572949 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
USP6-204ENST00000572949 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
USP6-204ENST00000572949 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
USP6-204ENST00000572949 MT1AP04731 61 aa2.68□□□□□ -1.98
USP6-204ENST00000572949 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
USP6-204ENST00000572949 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
USP6-204ENST00000572949 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
USP6-204ENST00000572949 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
USP6-204ENST00000572949 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
USP6-204ENST00000572949 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
USP6-204ENST00000572949 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
USP6-204ENST00000572949 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
USP6-204ENST00000572949 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
USP6-204ENST00000572949 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
USP6-204ENST00000572949 MUC17Q685J3 4493 aa2.57□□□□□ -2
USP6-204ENST00000572949 HMCN2Q8NDA2 5059 aa2.55□□□□□ -2
USP6-204ENST00000572949 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
USP6-204ENST00000572949 FAT4Q6V0I7 4981 aa2.53□□□□□ -2.01
USP6-204ENST00000572949 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
USP6-204ENST00000572949 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
USP6-204ENST00000572949 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
USP6-204ENST00000572949 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
USP6-204ENST00000572949 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
USP6-204ENST00000572949 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
USP6-204ENST00000572949 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
USP6-204ENST00000572949 MUC2Q02817 5179 aa2.26□□□□□ -2.05
USP6-204ENST00000572949 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
USP6-204ENST00000572949 USH2AO75445 5202 aa2.18□□□□□ -2.06
USP6-204ENST00000572949 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
USP6-204ENST00000572949 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
USP6-204ENST00000572949 KRTAP4-6Q9BYQ5 205 aa2.11□□□□□ -2.07
USP6-204ENST00000572949 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
USP6-204ENST00000572949 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
USP6-204ENST00000572949 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
USP6-204ENST00000572949 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
USP6-204ENST00000572949 NEBP20929 6669 aa2.04□□□□□ -2.08
USP6-204ENST00000572949 SSPOA2VEC9 5147 aa2.02□□□□□ -2.09
USP6-204ENST00000572949 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
USP6-204ENST00000572949 KRTAP5-9P26371 169 aa1.98□□□□□ -2.09
USP6-204ENST00000572949 KMT2DO14686 5537 aa1.95□□□□□ -2.1
USP6-204ENST00000572949 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
USP6-204ENST00000572949 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
USP6-204ENST00000572949 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
USP6-204ENST00000572949 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
USP6-204ENST00000572949 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
USP6-204ENST00000572949 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
USP6-204ENST00000572949 PHGR1C9JFL3 82 aa1.71□□□□□ -2.13
USP6-204ENST00000572949 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
USP6-204ENST00000572949 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
USP6-204ENST00000572949 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
USP6-204ENST00000572949 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
USP6-204ENST00000572949 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
USP6-204ENST00000572949 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
USP6-204ENST00000572949 KRTAP5-2Q701N4 177 aa1.39□□□□□ -2.19
USP6-204ENST00000572949 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
USP6-204ENST00000572949 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
USP6-204ENST00000572949 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
USP6-204ENST00000572949 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
USP6-204ENST00000572949 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
USP6-204ENST00000572949 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
USP6-204ENST00000572949 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
USP6-204ENST00000572949 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
USP6-204ENST00000572949 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 62.6 ms