RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
USP6-204ENST00000572949 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.04
USP6-204ENST00000572949 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
USP6-204ENST00000572949 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
USP6-204ENST00000572949 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
USP6-204ENST00000572949 APLP2Q06481 763 aa15.03■□□□□ -0
USP6-204ENST00000572949 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
USP6-204ENST00000572949 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
USP6-204ENST00000572949 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
USP6-204ENST00000572949 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
USP6-204ENST00000572949 ERICH6Q7L0X2 663 aa14.55□□□□□ -0.08
USP6-204ENST00000572949 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
USP6-204ENST00000572949 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
USP6-204ENST00000572949 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
USP6-204ENST00000572949 PCGF6Q9BYE7 350 aa14.22□□□□□ -0.13
USP6-204ENST00000572949 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
USP6-204ENST00000572949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
USP6-204ENST00000572949 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
USP6-204ENST00000572949 NEFLP07196 543 aa14.13□□□□□ -0.15
USP6-204ENST00000572949 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
USP6-204ENST00000572949 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
USP6-204ENST00000572949 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
USP6-204ENST00000572949 DAXXQ9UER7 740 aaPredicted RBP14.04□□□□□ -0.16
USP6-204ENST00000572949 POLR3GLQ9BT43 218 aa14.03□□□□□ -0.16
USP6-204ENST00000572949 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
USP6-204ENST00000572949 ZEB1P37275 1124 aaPredicted RBP13.82□□□□□ -0.2
USP6-204ENST00000572949 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
USP6-204ENST00000572949 MYT1Q01538 1121 aa13.82□□□□□ -0.2
USP6-204ENST00000572949 YTHDC1Q96MU7 727 aaKnown RBP13.82□□□□□ -0.2
USP6-204ENST00000572949 ITGAEP38570 1179 aa13.78□□□□□ -0.2
USP6-204ENST00000572949 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
USP6-204ENST00000572949 CLSPNQ9HAW4 1339 aa13.7□□□□□ -0.22
USP6-204ENST00000572949 BCANQ96GW7 911 aa13.66□□□□□ -0.22
USP6-204ENST00000572949 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
USP6-204ENST00000572949 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
USP6-204ENST00000572949 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
USP6-204ENST00000572949 BCL11AQ9H165 835 aa13.47□□□□□ -0.25
USP6-204ENST00000572949 FBLN2P98095 1184 aa13.46□□□□□ -0.25
USP6-204ENST00000572949 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
USP6-204ENST00000572949 NEFMP07197 916 aa13.43□□□□□ -0.26
USP6-204ENST00000572949 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
USP6-204ENST00000572949 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
USP6-204ENST00000572949 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
USP6-204ENST00000572949 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
USP6-204ENST00000572949 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
USP6-204ENST00000572949 CANXP27824 592 aaKnown RBP13.31□□□□□ -0.28
USP6-204ENST00000572949 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
USP6-204ENST00000572949 A0A0G2JS52 829 aa13.22□□□□□ -0.29
USP6-204ENST00000572949 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.3
USP6-204ENST00000572949 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
USP6-204ENST00000572949 TRIM26Q12899 539 aaPredicted RBP13.18□□□□□ -0.3
USP6-204ENST00000572949 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP6-204ENST00000572949 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
USP6-204ENST00000572949 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP6-204ENST00000572949 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.32
USP6-204ENST00000572949 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
USP6-204ENST00000572949 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
USP6-204ENST00000572949 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
USP6-204ENST00000572949 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
USP6-204ENST00000572949 ANP32CO43423 234 aa13.02□□□□□ -0.32
USP6-204ENST00000572949 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
USP6-204ENST00000572949 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
USP6-204ENST00000572949 ANP32BQ92688 251 aaKnown RBP12.97□□□□□ -0.33
USP6-204ENST00000572949 HRCP23327 699 aa12.97□□□□□ -0.33
USP6-204ENST00000572949 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
USP6-204ENST00000572949 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
USP6-204ENST00000572949 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
USP6-204ENST00000572949 ABCC9O60706 1549 aa12.93□□□□□ -0.34
USP6-204ENST00000572949 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
USP6-204ENST00000572949 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
USP6-204ENST00000572949 DIEXFQ68CQ4 756 aaKnown RBP12.88□□□□□ -0.35
USP6-204ENST00000572949 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
USP6-204ENST00000572949 ARXQ96QS3 562 aa12.84□□□□□ -0.35
USP6-204ENST00000572949 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
USP6-204ENST00000572949 NPHP1O15259 732 aa12.84□□□□□ -0.35
USP6-204ENST00000572949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP6-204ENST00000572949 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
USP6-204ENST00000572949 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
USP6-204ENST00000572949 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
USP6-204ENST00000572949 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
USP6-204ENST00000572949 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
USP6-204ENST00000572949 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
USP6-204ENST00000572949 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
USP6-204ENST00000572949 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
USP6-204ENST00000572949 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP6-204ENST00000572949 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
USP6-204ENST00000572949 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
USP6-204ENST00000572949 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
USP6-204ENST00000572949 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
USP6-204ENST00000572949 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
USP6-204ENST00000572949 TONSLQ96HA7 1378 aa12.6□□□□□ -0.39
USP6-204ENST00000572949 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
USP6-204ENST00000572949 KDM2AQ9Y2K7 1162 aa12.59□□□□□ -0.39
USP6-204ENST00000572949 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
USP6-204ENST00000572949 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
USP6-204ENST00000572949 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
USP6-204ENST00000572949 CLSTN1O94985 981 aa12.56□□□□□ -0.4
USP6-204ENST00000572949 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
USP6-204ENST00000572949 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
USP6-204ENST00000572949 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms