RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
TRPV1-206ENST00000571088 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
TRPV1-206ENST00000571088 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
TRPV1-206ENST00000571088 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
TRPV1-206ENST00000571088 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
TRPV1-206ENST00000571088 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
TRPV1-206ENST00000571088 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
TRPV1-206ENST00000571088 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
TRPV1-206ENST00000571088 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
TRPV1-206ENST00000571088 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
TRPV1-206ENST00000571088 MT1MQ8N339 61 aa4.23□□□□□ -1.73
TRPV1-206ENST00000571088 USH2AO75445 5202 aa4.19□□□□□ -1.74
TRPV1-206ENST00000571088 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
TRPV1-206ENST00000571088 KMT2DO14686 5537 aa4.18□□□□□ -1.74
TRPV1-206ENST00000571088 PRM1P04553 51 aa4.13□□□□□ -1.75
TRPV1-206ENST00000571088 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
TRPV1-206ENST00000571088 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
TRPV1-206ENST00000571088 SPRR2EP22531 72 aa3.98□□□□□ -1.77
TRPV1-206ENST00000571088 SPRR2BP35325 72 aa3.98□□□□□ -1.77
TRPV1-206ENST00000571088 SPRR2AP35326 72 aa3.98□□□□□ -1.77
TRPV1-206ENST00000571088 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.78
TRPV1-206ENST00000571088 MT1AP04731 61 aa3.88□□□□□ -1.79
TRPV1-206ENST00000571088 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
TRPV1-206ENST00000571088 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
TRPV1-206ENST00000571088 SPRR2DP22532 72 aa3.82□□□□□ -1.8
TRPV1-206ENST00000571088 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
TRPV1-206ENST00000571088 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
TRPV1-206ENST00000571088 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
TRPV1-206ENST00000571088 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
TRPV1-206ENST00000571088 MT3P25713 68 aa3.75□□□□□ -1.81
TRPV1-206ENST00000571088 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
TRPV1-206ENST00000571088 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
TRPV1-206ENST00000571088 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.84
TRPV1-206ENST00000571088 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
TRPV1-206ENST00000571088 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
TRPV1-206ENST00000571088 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
TRPV1-206ENST00000571088 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
TRPV1-206ENST00000571088 MT4P47944 62 aa3.42□□□□□ -1.86
TRPV1-206ENST00000571088 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
TRPV1-206ENST00000571088 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
TRPV1-206ENST00000571088 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
TRPV1-206ENST00000571088 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
TRPV1-206ENST00000571088 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
TRPV1-206ENST00000571088 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
TRPV1-206ENST00000571088 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
TRPV1-206ENST00000571088 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
TRPV1-206ENST00000571088 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
TRPV1-206ENST00000571088 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.92
TRPV1-206ENST00000571088 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
TRPV1-206ENST00000571088 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
TRPV1-206ENST00000571088 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
TRPV1-206ENST00000571088 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
TRPV1-206ENST00000571088 NEBP20929 6669 aa2.86□□□□□ -1.95
TRPV1-206ENST00000571088 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
TRPV1-206ENST00000571088 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TRPV1-206ENST00000571088 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
TRPV1-206ENST00000571088 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
TRPV1-206ENST00000571088 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
TRPV1-206ENST00000571088 LCE1CQ5T751 118 aa2.58□□□□□ -2
TRPV1-206ENST00000571088 LCE1FQ5T754 118 aa2.58□□□□□ -2
TRPV1-206ENST00000571088 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
TRPV1-206ENST00000571088 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
TRPV1-206ENST00000571088 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
TRPV1-206ENST00000571088 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
TRPV1-206ENST00000571088 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
TRPV1-206ENST00000571088 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TRPV1-206ENST00000571088 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TRPV1-206ENST00000571088 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
TRPV1-206ENST00000571088 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
TRPV1-206ENST00000571088 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TRPV1-206ENST00000571088 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
TRPV1-206ENST00000571088 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
TRPV1-206ENST00000571088 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
TRPV1-206ENST00000571088 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
TRPV1-206ENST00000571088 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TRPV1-206ENST00000571088 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
TRPV1-206ENST00000571088 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms