RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
UBR1-211ENST00000569971 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
UBR1-211ENST00000569971 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
UBR1-211ENST00000569971 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
UBR1-211ENST00000569971 LRP2P98164 4655 aa1.44□□□□□ -2.18
UBR1-211ENST00000569971 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
UBR1-211ENST00000569971 EPPK1P58107 5090 aaKnown RBP1.44□□□□□ -2.18
UBR1-211ENST00000569971 LPAP08519 4548 aa1.43□□□□□ -2.18
UBR1-211ENST00000569971 MUC17Q685J3 4493 aa1.42□□□□□ -2.18
UBR1-211ENST00000569971 M0R2T5 61 aa1.41□□□□□ -2.18
UBR1-211ENST00000569971 TNP1P09430 55 aa1.4□□□□□ -2.19
UBR1-211ENST00000569971 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
UBR1-211ENST00000569971 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
UBR1-211ENST00000569971 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
UBR1-211ENST00000569971 HERC2O95714 4834 aa1.38□□□□□ -2.19
UBR1-211ENST00000569971 MT1HP80294 61 aa1.37□□□□□ -2.19
UBR1-211ENST00000569971 BIRC6Q9NR09 4857 aa1.37□□□□□ -2.19
UBR1-211ENST00000569971 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
UBR1-211ENST00000569971 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
UBR1-211ENST00000569971 MT2AP02795 61 aa1.34□□□□□ -2.19
UBR1-211ENST00000569971 MT1FP04733 61 aa1.33□□□□□ -2.2
UBR1-211ENST00000569971 KRTAP19-8Q3LI54 63 aa1.32□□□□□ -2.2
UBR1-211ENST00000569971 HERC1Q15751 4861 aa1.31□□□□□ -2.2
UBR1-211ENST00000569971 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
UBR1-211ENST00000569971 FLGP20930 4061 aaPredicted RBP1.3□□□□□ -2.2
UBR1-211ENST00000569971 MT1BP07438 61 aa1.28□□□□□ -2.2
UBR1-211ENST00000569971 PCLOQ9Y6V0 5065 aa1.27□□□□□ -2.21
UBR1-211ENST00000569971 MUC2Q02817 5179 aa1.27□□□□□ -2.21
UBR1-211ENST00000569971 MT1XP80297 61 aa1.27□□□□□ -2.21
UBR1-211ENST00000569971 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
UBR1-211ENST00000569971 RNF213Q63HN8 5207 aa1.22□□□□□ -2.21
UBR1-211ENST00000569971 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
UBR1-211ENST00000569971 UBR4Q5T4S7 5183 aa1.2□□□□□ -2.22
UBR1-211ENST00000569971 INE1O15225 51 aa1.19□□□□□ -2.22
UBR1-211ENST00000569971 KRTAP19-5Q3LI72 72 aa1.18□□□□□ -2.22
UBR1-211ENST00000569971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
UBR1-211ENST00000569971 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
UBR1-211ENST00000569971 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
UBR1-211ENST00000569971 MT1EP04732 61 aa1.11□□□□□ -2.23
UBR1-211ENST00000569971 MT1LQ93083 61 aa1.1□□□□□ -2.23
UBR1-211ENST00000569971 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
UBR1-211ENST00000569971 MT1GP13640 62 aa1.06□□□□□ -2.24
UBR1-211ENST00000569971 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
UBR1-211ENST00000569971 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
UBR1-211ENST00000569971 USH2AO75445 5202 aa1.06□□□□□ -2.24
UBR1-211ENST00000569971 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
UBR1-211ENST00000569971 SSPOA2VEC9 5147 aa1.04□□□□□ -2.24
UBR1-211ENST00000569971 MT1MQ8N339 61 aa1.04□□□□□ -2.24
UBR1-211ENST00000569971 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
UBR1-211ENST00000569971 KMT2DO14686 5537 aa1□□□□□ -2.25
UBR1-211ENST00000569971 SPRR2EP22531 72 aa0.95□□□□□ -2.26
UBR1-211ENST00000569971 SPRR2BP35325 72 aa0.95□□□□□ -2.26
UBR1-211ENST00000569971 SPRR2AP35326 72 aa0.95□□□□□ -2.26
UBR1-211ENST00000569971 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
UBR1-211ENST00000569971 MT1AP04731 61 aa0.94□□□□□ -2.26
UBR1-211ENST00000569971 SPRR2DP22532 72 aa0.92□□□□□ -2.26
UBR1-211ENST00000569971 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
UBR1-211ENST00000569971 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
UBR1-211ENST00000569971 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
UBR1-211ENST00000569971 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
UBR1-211ENST00000569971 SYNE2Q8WXH0 6885 aaKnown RBP0.84□□□□□ -2.27
UBR1-211ENST00000569971 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
UBR1-211ENST00000569971 GPR98Q8WXG9 6306 aa0.82□□□□□ -2.28
UBR1-211ENST00000569971 PRM1P04553 51 aa0.82□□□□□ -2.28
UBR1-211ENST00000569971 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
UBR1-211ENST00000569971 MT4P47944 62 aa0.78□□□□□ -2.28
UBR1-211ENST00000569971 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
UBR1-211ENST00000569971 SYNE1Q8NF91 8797 aaKnown RBP0.77□□□□□ -2.29
UBR1-211ENST00000569971 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
UBR1-211ENST00000569971 KRTAP20-1Q3LI63 56 aa0.76□□□□□ -2.29
UBR1-211ENST00000569971 NEBP20929 6669 aa0.75□□□□□ -2.29
UBR1-211ENST00000569971 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
UBR1-211ENST00000569971 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
UBR1-211ENST00000569971 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
UBR1-211ENST00000569971 MUC5ACP98088 5654 aa0.65□□□□□ -2.31
UBR1-211ENST00000569971 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
UBR1-211ENST00000569971 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
UBR1-211ENST00000569971 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 29.1 ms