RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
UBR1-211ENST00000569971 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
UBR1-211ENST00000569971 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
UBR1-211ENST00000569971 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
UBR1-211ENST00000569971 FOXD1Q16676 465 aa16.15■□□□□ 0.18
UBR1-211ENST00000569971 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
UBR1-211ENST00000569971 MSH5O43196 834 aa15.28■□□□□ 0.04
UBR1-211ENST00000569971 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
UBR1-211ENST00000569971 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
UBR1-211ENST00000569971 ADRA2BP18089 450 aa14.93□□□□□ -0.02
UBR1-211ENST00000569971 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
UBR1-211ENST00000569971 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
UBR1-211ENST00000569971 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
UBR1-211ENST00000569971 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
UBR1-211ENST00000569971 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
UBR1-211ENST00000569971 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
UBR1-211ENST00000569971 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
UBR1-211ENST00000569971 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
UBR1-211ENST00000569971 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
UBR1-211ENST00000569971 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
UBR1-211ENST00000569971 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
UBR1-211ENST00000569971 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
UBR1-211ENST00000569971 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
UBR1-211ENST00000569971 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
UBR1-211ENST00000569971 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
UBR1-211ENST00000569971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBR1-211ENST00000569971 KCNA4P22459 653 aa12.38□□□□□ -0.43
UBR1-211ENST00000569971 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
UBR1-211ENST00000569971 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
UBR1-211ENST00000569971 APLP2Q06481 763 aa12.15□□□□□ -0.46
UBR1-211ENST00000569971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
UBR1-211ENST00000569971 CAPN15O75808 1086 aa12.11□□□□□ -0.47
UBR1-211ENST00000569971 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
UBR1-211ENST00000569971 DSG3P32926 999 aa12.1□□□□□ -0.47
UBR1-211ENST00000569971 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
UBR1-211ENST00000569971 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
UBR1-211ENST00000569971 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
UBR1-211ENST00000569971 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
UBR1-211ENST00000569971 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
UBR1-211ENST00000569971 ABCB7O75027 752 aa11.77□□□□□ -0.53
UBR1-211ENST00000569971 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
UBR1-211ENST00000569971 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
UBR1-211ENST00000569971 POTEHQ6S545 545 aa11.66□□□□□ -0.54
UBR1-211ENST00000569971 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
UBR1-211ENST00000569971 POLA2Q14181 598 aa11.58□□□□□ -0.56
UBR1-211ENST00000569971 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
UBR1-211ENST00000569971 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
UBR1-211ENST00000569971 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
UBR1-211ENST00000569971 ZBTB22O15209 634 aa11.36□□□□□ -0.59
UBR1-211ENST00000569971 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
UBR1-211ENST00000569971 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
UBR1-211ENST00000569971 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
UBR1-211ENST00000569971 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
UBR1-211ENST00000569971 FBLN2P98095 1184 aa11.13□□□□□ -0.63
UBR1-211ENST00000569971 SPDYE2BA6NHP3 402 aa11.1□□□□□ -0.63
UBR1-211ENST00000569971 SPDYE6P0CI01 402 aa11.1□□□□□ -0.63
UBR1-211ENST00000569971 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
UBR1-211ENST00000569971 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
UBR1-211ENST00000569971 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
UBR1-211ENST00000569971 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.65
UBR1-211ENST00000569971 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
UBR1-211ENST00000569971 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
UBR1-211ENST00000569971 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
UBR1-211ENST00000569971 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
UBR1-211ENST00000569971 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
UBR1-211ENST00000569971 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
UBR1-211ENST00000569971 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
UBR1-211ENST00000569971 HAX1O00165 279 aa10.8□□□□□ -0.68
UBR1-211ENST00000569971 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
UBR1-211ENST00000569971 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
UBR1-211ENST00000569971 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
UBR1-211ENST00000569971 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
UBR1-211ENST00000569971 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
UBR1-211ENST00000569971 EVX2Q03828 476 aa10.59□□□□□ -0.71
UBR1-211ENST00000569971 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
UBR1-211ENST00000569971 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
UBR1-211ENST00000569971 CLCN6P51797 869 aa10.49□□□□□ -0.73
UBR1-211ENST00000569971 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
UBR1-211ENST00000569971 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
UBR1-211ENST00000569971 GABBR2O75899 941 aa10.44□□□□□ -0.74
UBR1-211ENST00000569971 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
UBR1-211ENST00000569971 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
UBR1-211ENST00000569971 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
UBR1-211ENST00000569971 PROM2Q8N271 834 aa10.27□□□□□ -0.77
UBR1-211ENST00000569971 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
UBR1-211ENST00000569971 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
UBR1-211ENST00000569971 LHX8Q68G74 356 aa10.22□□□□□ -0.77
UBR1-211ENST00000569971 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
UBR1-211ENST00000569971 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
UBR1-211ENST00000569971 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
UBR1-211ENST00000569971 DCBLD2Q96PD2 775 aa10.18□□□□□ -0.78
UBR1-211ENST00000569971 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
UBR1-211ENST00000569971 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
UBR1-211ENST00000569971 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
UBR1-211ENST00000569971 ASTLQ6HA08 431 aaPredicted RBP9.97□□□□□ -0.81
UBR1-211ENST00000569971 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
UBR1-211ENST00000569971 MS4A3Q96HJ5 214 aa9.94□□□□□ -0.82
UBR1-211ENST00000569971 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
UBR1-211ENST00000569971 MIER1Q8N108 512 aa9.93□□□□□ -0.82
UBR1-211ENST00000569971 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms