RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
CNOT1-216ENST00000569240 KRTAP4-8Q9BYQ9 185 aa2.06□□□□□ -2.08
CNOT1-216ENST00000569240 LRP2P98164 4655 aa2.06□□□□□ -2.08
CNOT1-216ENST00000569240 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
CNOT1-216ENST00000569240 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
CNOT1-216ENST00000569240 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
CNOT1-216ENST00000569240 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
CNOT1-216ENST00000569240 USH2AO75445 5202 aa2.01□□□□□ -2.09
CNOT1-216ENST00000569240 KRTAP9-6A0A140TA67 174 aa1.99□□□□□ -2.09
CNOT1-216ENST00000569240 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
CNOT1-216ENST00000569240 KRTAP4-7Q9BYR0 210 aa1.99□□□□□ -2.09
CNOT1-216ENST00000569240 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
CNOT1-216ENST00000569240 KRTAP17-1Q9BYP8 105 aa1.95□□□□□ -2.1
CNOT1-216ENST00000569240 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
CNOT1-216ENST00000569240 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
CNOT1-216ENST00000569240 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
CNOT1-216ENST00000569240 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
CNOT1-216ENST00000569240 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
CNOT1-216ENST00000569240 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
CNOT1-216ENST00000569240 KRTAP9-4Q9BYQ2 154 aa1.87□□□□□ -2.11
CNOT1-216ENST00000569240 LOC100996750A0A140TA64 210 aa1.85□□□□□ -2.11
CNOT1-216ENST00000569240 KRTAP9-7A8MTY7 169 aa1.85□□□□□ -2.11
CNOT1-216ENST00000569240 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
CNOT1-216ENST00000569240 MT4P47944 62 aa1.81□□□□□ -2.12
CNOT1-216ENST00000569240 LCE5AQ5TCM9 118 aa1.81□□□□□ -2.12
CNOT1-216ENST00000569240 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
CNOT1-216ENST00000569240 LCE2AQ5TA79 106 aaPredicted RBP1.79□□□□□ -2.12
CNOT1-216ENST00000569240 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
CNOT1-216ENST00000569240 LCE1DQ5T752 114 aa1.77□□□□□ -2.13
CNOT1-216ENST00000569240 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
CNOT1-216ENST00000569240 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
CNOT1-216ENST00000569240 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
CNOT1-216ENST00000569240 LCE4AQ5TA78 99 aa1.74□□□□□ -2.13
CNOT1-216ENST00000569240 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
CNOT1-216ENST00000569240 MUC2Q02817 5179 aa1.73□□□□□ -2.13
CNOT1-216ENST00000569240 NEBP20929 6669 aa1.69□□□□□ -2.14
CNOT1-216ENST00000569240 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
CNOT1-216ENST00000569240 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.14
CNOT1-216ENST00000569240 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
CNOT1-216ENST00000569240 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.65□□□□□ -2.15
CNOT1-216ENST00000569240 KMT2DO14686 5537 aa1.59□□□□□ -2.15
CNOT1-216ENST00000569240 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
CNOT1-216ENST00000569240 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
CNOT1-216ENST00000569240 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
CNOT1-216ENST00000569240 KRTAP9-9Q9BYP9 154 aa1.57□□□□□ -2.16
CNOT1-216ENST00000569240 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CNOT1-216ENST00000569240 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
CNOT1-216ENST00000569240 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CNOT1-216ENST00000569240 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
CNOT1-216ENST00000569240 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
CNOT1-216ENST00000569240 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
CNOT1-216ENST00000569240 KRTAP5-9P26371 169 aa1.48□□□□□ -2.17
CNOT1-216ENST00000569240 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
CNOT1-216ENST00000569240 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
CNOT1-216ENST00000569240 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.18
CNOT1-216ENST00000569240 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CNOT1-216ENST00000569240 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
CNOT1-216ENST00000569240 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
CNOT1-216ENST00000569240 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
CNOT1-216ENST00000569240 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
CNOT1-216ENST00000569240 KRTAP4-6Q9BYQ5 205 aa1.29□□□□□ -2.2
CNOT1-216ENST00000569240 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
CNOT1-216ENST00000569240 KRTAP4-12Q9BQ66 201 aa1.22□□□□□ -2.21
CNOT1-216ENST00000569240 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
CNOT1-216ENST00000569240 KRTAP4-2Q9BYR5 136 aa1.16□□□□□ -2.22
CNOT1-216ENST00000569240 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CNOT1-216ENST00000569240 KRTAP5-3Q6L8H2 238 aa1.15□□□□□ -2.23
CNOT1-216ENST00000569240 KRTAP5-2Q701N4 177 aa1.11□□□□□ -2.23
CNOT1-216ENST00000569240 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
CNOT1-216ENST00000569240 KRTAP5-8O75690 187 aa1.09□□□□□ -2.24
CNOT1-216ENST00000569240 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
CNOT1-216ENST00000569240 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
CNOT1-216ENST00000569240 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
CNOT1-216ENST00000569240 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
CNOT1-216ENST00000569240 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
CNOT1-216ENST00000569240 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
CNOT1-216ENST00000569240 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms