RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
CNOT1-211ENST00000567188 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
CNOT1-211ENST00000567188 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
CNOT1-211ENST00000567188 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
CNOT1-211ENST00000567188 LOC100996750A0A140TA64 210 aa2.03□□□□□ -2.08
CNOT1-211ENST00000567188 RNF213Q63HN8 5207 aa2.02□□□□□ -2.09
CNOT1-211ENST00000567188 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
CNOT1-211ENST00000567188 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
CNOT1-211ENST00000567188 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
CNOT1-211ENST00000567188 MT4P47944 62 aa2□□□□□ -2.09
CNOT1-211ENST00000567188 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
CNOT1-211ENST00000567188 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
CNOT1-211ENST00000567188 MT1LQ93083 61 aa1.96□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
CNOT1-211ENST00000567188 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
CNOT1-211ENST00000567188 MT1EP04732 61 aa1.93□□□□□ -2.1
CNOT1-211ENST00000567188 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
CNOT1-211ENST00000567188 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
CNOT1-211ENST00000567188 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
CNOT1-211ENST00000567188 USH2AO75445 5202 aa1.89□□□□□ -2.11
CNOT1-211ENST00000567188 PRM1P04553 51 aa1.88□□□□□ -2.11
CNOT1-211ENST00000567188 KMT2DO14686 5537 aa1.87□□□□□ -2.11
CNOT1-211ENST00000567188 MT1MQ8N339 61 aa1.87□□□□□ -2.11
CNOT1-211ENST00000567188 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
CNOT1-211ENST00000567188 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
CNOT1-211ENST00000567188 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
CNOT1-211ENST00000567188 MT1AP04731 61 aa1.79□□□□□ -2.12
CNOT1-211ENST00000567188 MACF1Q9UPN3 7388 aaKnown RBP1.78□□□□□ -2.12
CNOT1-211ENST00000567188 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
CNOT1-211ENST00000567188 KRTAP9-9Q9BYP9 154 aa1.75□□□□□ -2.13
CNOT1-211ENST00000567188 LCE4AQ5TA78 99 aa1.7□□□□□ -2.14
CNOT1-211ENST00000567188 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
CNOT1-211ENST00000567188 KRTAP2-2Q9BYT5 123 aa1.69□□□□□ -2.14
CNOT1-211ENST00000567188 KRTAP9-6A8MVA2 160 aa1.65□□□□□ -2.14
CNOT1-211ENST00000567188 NEBP20929 6669 aa1.65□□□□□ -2.15
CNOT1-211ENST00000567188 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
CNOT1-211ENST00000567188 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
CNOT1-211ENST00000567188 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
CNOT1-211ENST00000567188 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
CNOT1-211ENST00000567188 KRTAP9-4Q9BYQ2 154 aa1.61□□□□□ -2.15
CNOT1-211ENST00000567188 FCGBPQ9Y6R7 5405 aaPredicted RBP1.52□□□□□ -2.17
CNOT1-211ENST00000567188 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
CNOT1-211ENST00000567188 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
CNOT1-211ENST00000567188 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
CNOT1-211ENST00000567188 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
CNOT1-211ENST00000567188 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
CNOT1-211ENST00000567188 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
CNOT1-211ENST00000567188 KRTAP4-12Q9BQ66 201 aa1.37□□□□□ -2.19
CNOT1-211ENST00000567188 KRTAP4-2Q9BYR5 136 aa1.37□□□□□ -2.19
CNOT1-211ENST00000567188 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
CNOT1-211ENST00000567188 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
CNOT1-211ENST00000567188 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
CNOT1-211ENST00000567188 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
CNOT1-211ENST00000567188 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
CNOT1-211ENST00000567188 KRTAP4-11Q9BYQ6 195 aa1.27□□□□□ -2.21
CNOT1-211ENST00000567188 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
CNOT1-211ENST00000567188 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
CNOT1-211ENST00000567188 KRTAP5-3Q6L8H2 238 aa1.24□□□□□ -2.21
CNOT1-211ENST00000567188 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
CNOT1-211ENST00000567188 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
CNOT1-211ENST00000567188 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CNOT1-211ENST00000567188 KRTAP5-2Q701N4 177 aa1.15□□□□□ -2.23
CNOT1-211ENST00000567188 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
CNOT1-211ENST00000567188 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CNOT1-211ENST00000567188 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
CNOT1-211ENST00000567188 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
CNOT1-211ENST00000567188 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
CNOT1-211ENST00000567188 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
CNOT1-211ENST00000567188 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.92□□□□□ -2.26
CNOT1-211ENST00000567188 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
CNOT1-211ENST00000567188 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 180 ms