RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
VRK1-206ENST00000557222 MT1GP13640 62 aa3.18□□□□□ -1.9
VRK1-206ENST00000557222 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
VRK1-206ENST00000557222 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
VRK1-206ENST00000557222 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
VRK1-206ENST00000557222 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
VRK1-206ENST00000557222 J3QR89 54 aa3.14□□□□□ -1.91
VRK1-206ENST00000557222 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
VRK1-206ENST00000557222 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
VRK1-206ENST00000557222 A0A0D9SG42 100 aa3.11□□□□□ -1.91
VRK1-206ENST00000557222 MT4P47944 62 aa3.1□□□□□ -1.91
VRK1-206ENST00000557222 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
VRK1-206ENST00000557222 SPANXA2-OT1Q8N9U9 137 aa3.09□□□□□ -1.91
VRK1-206ENST00000557222 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
VRK1-206ENST00000557222 MT1MQ8N339 61 aa3.08□□□□□ -1.92
VRK1-206ENST00000557222 MT1LQ93083 61 aa3.05□□□□□ -1.92
VRK1-206ENST00000557222 SEC61GP60059 68 aa3.03□□□□□ -1.92
VRK1-206ENST00000557222 A0A1B0GV90 55 aa3.02□□□□□ -1.93
VRK1-206ENST00000557222 SNURFQ9Y675 71 aa3.02□□□□□ -1.93
VRK1-206ENST00000557222 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
VRK1-206ENST00000557222 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
VRK1-206ENST00000557222 LCE1CQ5T751 118 aa3□□□□□ -1.93
VRK1-206ENST00000557222 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
VRK1-206ENST00000557222 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
VRK1-206ENST00000557222 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
VRK1-206ENST00000557222 A0A1B0GU33 70 aa2.98□□□□□ -1.93
VRK1-206ENST00000557222 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
VRK1-206ENST00000557222 COA5Q86WW8 74 aa2.97□□□□□ -1.93
VRK1-206ENST00000557222 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
VRK1-206ENST00000557222 TNP1P09430 55 aa2.93□□□□□ -1.94
VRK1-206ENST00000557222 SERP2Q8N6R1 65 aa2.93□□□□□ -1.94
VRK1-206ENST00000557222 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
VRK1-206ENST00000557222 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
VRK1-206ENST00000557222 K7ERU9 68 aa2.91□□□□□ -1.94
VRK1-206ENST00000557222 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
VRK1-206ENST00000557222 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
VRK1-206ENST00000557222 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
VRK1-206ENST00000557222 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
VRK1-206ENST00000557222 A0A1B0GU69 56 aa2.83□□□□□ -1.96
VRK1-206ENST00000557222 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
VRK1-206ENST00000557222 H7BZZ5 65 aa2.78□□□□□ -1.96
VRK1-206ENST00000557222 COX7CP15954 63 aa2.77□□□□□ -1.97
VRK1-206ENST00000557222 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
VRK1-206ENST00000557222 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
VRK1-206ENST00000557222 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
VRK1-206ENST00000557222 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
VRK1-206ENST00000557222 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
VRK1-206ENST00000557222 LINC01558Q9Y6Z2 57 aa2.64□□□□□ -1.99
VRK1-206ENST00000557222 UQCR11O14957 56 aa2.62□□□□□ -1.99
VRK1-206ENST00000557222 MT1AP04731 61 aa2.61□□□□□ -1.99
VRK1-206ENST00000557222 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
VRK1-206ENST00000557222 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
VRK1-206ENST00000557222 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
VRK1-206ENST00000557222 K7ERS5 55 aa2.54□□□□□ -2
VRK1-206ENST00000557222 ANAPC13Q9BS18 74 aa2.54□□□□□ -2
VRK1-206ENST00000557222 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
VRK1-206ENST00000557222 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
VRK1-206ENST00000557222 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
VRK1-206ENST00000557222 CCDC179H3BU77 68 aa2.48□□□□□ -2.01
VRK1-206ENST00000557222 TMEM258P61165 79 aa2.42□□□□□ -2.02
VRK1-206ENST00000557222 RPS28P62857 69 aaKnown RBP2.39□□□□□ -2.03
VRK1-206ENST00000557222 V9GYY9 64 aa2.38□□□□□ -2.03
VRK1-206ENST00000557222 Q1T7F1 81 aa2.36□□□□□ -2.03
VRK1-206ENST00000557222 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
VRK1-206ENST00000557222 PSPHP1O15172 72 aa2.32□□□□□ -2.04
VRK1-206ENST00000557222 ROMO1P60602 79 aa2.31□□□□□ -2.04
VRK1-206ENST00000557222 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
VRK1-206ENST00000557222 A6NED7 52 aa2.25□□□□□ -2.05
VRK1-206ENST00000557222 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
VRK1-206ENST00000557222 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
VRK1-206ENST00000557222 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
VRK1-206ENST00000557222 BRK1Q8WUW1 75 aa1.9□□□□□ -2.11
VRK1-206ENST00000557222 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
VRK1-206ENST00000557222 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
VRK1-206ENST00000557222 INE1O15225 51 aa1.49□□□□□ -2.17
VRK1-206ENST00000557222 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
VRK1-206ENST00000557222 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
VRK1-206ENST00000557222 PRM1P04553 51 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 144.6 ms