RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
PRPF39-211ENST00000556782 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
PRPF39-211ENST00000556782 K7ERU9 68 aa2.15□□□□□ -2.07
PRPF39-211ENST00000556782 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
PRPF39-211ENST00000556782 SNURFQ9Y675 71 aa2.14□□□□□ -2.07
PRPF39-211ENST00000556782 SPANXA2-OT1Q8N9U9 137 aa2.12□□□□□ -2.07
PRPF39-211ENST00000556782 SPRR2DP22532 72 aa2.11□□□□□ -2.07
PRPF39-211ENST00000556782 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
PRPF39-211ENST00000556782 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
PRPF39-211ENST00000556782 SERP2Q8N6R1 65 aa2.09□□□□□ -2.07
PRPF39-211ENST00000556782 COA5Q86WW8 74 aa2.07□□□□□ -2.08
PRPF39-211ENST00000556782 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
PRPF39-211ENST00000556782 A0A0D9SG42 100 aa2.02□□□□□ -2.09
PRPF39-211ENST00000556782 COX7CP15954 63 aa2.02□□□□□ -2.09
PRPF39-211ENST00000556782 SEC61GP60059 68 aa2.02□□□□□ -2.09
PRPF39-211ENST00000556782 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
PRPF39-211ENST00000556782 SERP1Q9Y6X1 66 aa2.02□□□□□ -2.09
PRPF39-211ENST00000556782 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
PRPF39-211ENST00000556782 H7BZZ5 65 aa2□□□□□ -2.09
PRPF39-211ENST00000556782 MT1EP04732 61 aa2□□□□□ -2.09
PRPF39-211ENST00000556782 CYSTM1Q9H1C7 97 aa2□□□□□ -2.09
PRPF39-211ENST00000556782 A0A1B0GU33 70 aa1.99□□□□□ -2.09
PRPF39-211ENST00000556782 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
PRPF39-211ENST00000556782 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
PRPF39-211ENST00000556782 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
PRPF39-211ENST00000556782 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
PRPF39-211ENST00000556782 SMIM26A0A096LP01 95 aa1.95□□□□□ -2.1
PRPF39-211ENST00000556782 A0A1B0GU69 56 aa1.95□□□□□ -2.1
PRPF39-211ENST00000556782 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
PRPF39-211ENST00000556782 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
PRPF39-211ENST00000556782 MT1GP13640 62 aa1.93□□□□□ -2.1
PRPF39-211ENST00000556782 ANAPC13Q9BS18 74 aa1.93□□□□□ -2.1
PRPF39-211ENST00000556782 MT1LQ93083 61 aa1.91□□□□□ -2.1
PRPF39-211ENST00000556782 MT1MQ8N339 61 aa1.9□□□□□ -2.11
PRPF39-211ENST00000556782 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.11
PRPF39-211ENST00000556782 CCDC179H3BU77 68 aa1.89□□□□□ -2.11
PRPF39-211ENST00000556782 TNP1P09430 55 aa1.89□□□□□ -2.11
PRPF39-211ENST00000556782 ATP5EP56381 51 aaPredicted RBP1.89□□□□□ -2.11
PRPF39-211ENST00000556782 PRR15LQ9BU68 103 aa1.89□□□□□ -2.11
PRPF39-211ENST00000556782 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PRPF39-211ENST00000556782 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
PRPF39-211ENST00000556782 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
PRPF39-211ENST00000556782 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
PRPF39-211ENST00000556782 MT4P47944 62 aa1.85□□□□□ -2.11
PRPF39-211ENST00000556782 UQCR11O14957 56 aa1.82□□□□□ -2.12
PRPF39-211ENST00000556782 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
PRPF39-211ENST00000556782 TMEM258P61165 79 aa1.82□□□□□ -2.12
PRPF39-211ENST00000556782 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
PRPF39-211ENST00000556782 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
PRPF39-211ENST00000556782 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
PRPF39-211ENST00000556782 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
PRPF39-211ENST00000556782 K7ERS5 55 aa1.74□□□□□ -2.13
PRPF39-211ENST00000556782 PSPHP1O15172 72 aa1.73□□□□□ -2.13
PRPF39-211ENST00000556782 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
PRPF39-211ENST00000556782 V9GYY9 64 aa1.73□□□□□ -2.13
PRPF39-211ENST00000556782 Q1T7F1 81 aa1.72□□□□□ -2.13
PRPF39-211ENST00000556782 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
PRPF39-211ENST00000556782 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
PRPF39-211ENST00000556782 A6NED7 52 aa1.67□□□□□ -2.14
PRPF39-211ENST00000556782 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
PRPF39-211ENST00000556782 ROMO1P60602 79 aa1.63□□□□□ -2.15
PRPF39-211ENST00000556782 MT1AP04731 61 aa1.62□□□□□ -2.15
PRPF39-211ENST00000556782 RPS28P62857 69 aaKnown RBP1.61□□□□□ -2.15
PRPF39-211ENST00000556782 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
PRPF39-211ENST00000556782 LUZP6Q538Z0 58 aa1.6□□□□□ -2.15
PRPF39-211ENST00000556782 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
PRPF39-211ENST00000556782 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
PRPF39-211ENST00000556782 PRO0628Q9UI54 55 aa1.47□□□□□ -2.17
PRPF39-211ENST00000556782 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
PRPF39-211ENST00000556782 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
PRPF39-211ENST00000556782 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
PRPF39-211ENST00000556782 PMAIP1Q13794 54 aa1.34□□□□□ -2.19
PRPF39-211ENST00000556782 KTN1-AS1Q86SY8 53 aa1.16□□□□□ -2.22
PRPF39-211ENST00000556782 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
PRPF39-211ENST00000556782 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
PRPF39-211ENST00000556782 INE1O15225 51 aa0.83□□□□□ -2.28
PRPF39-211ENST00000556782 PRM1P04553 51 aa0.83□□□□□ -2.28
PRPF39-211ENST00000556782 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms