RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 HERC1Q15751 4861 aa1.91□□□□□ -2.1
PCNX1-212ENST00000556516 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.1
PCNX1-212ENST00000556516 KRTAP19-2Q3LHN2 52 aa1.9□□□□□ -2.11
PCNX1-212ENST00000556516 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
PCNX1-212ENST00000556516 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
PCNX1-212ENST00000556516 MT1HP80294 61 aa1.86□□□□□ -2.11
PCNX1-212ENST00000556516 A0A0D9SG42 100 aa1.85□□□□□ -2.11
PCNX1-212ENST00000556516 LINC01554Q52M75 96 aa1.84□□□□□ -2.11
PCNX1-212ENST00000556516 A6NN06 94 aa1.83□□□□□ -2.12
PCNX1-212ENST00000556516 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
PCNX1-212ENST00000556516 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
PCNX1-212ENST00000556516 MUC2Q02817 5179 aa1.82□□□□□ -2.12
PCNX1-212ENST00000556516 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
PCNX1-212ENST00000556516 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
PCNX1-212ENST00000556516 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
PCNX1-212ENST00000556516 MT2AP02795 61 aa1.79□□□□□ -2.12
PCNX1-212ENST00000556516 ROMO1P60602 79 aa1.79□□□□□ -2.12
PCNX1-212ENST00000556516 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
PCNX1-212ENST00000556516 FLGP20930 4061 aaPredicted RBP1.79□□□□□ -2.12
PCNX1-212ENST00000556516 RNF213Q63HN8 5207 aa1.79□□□□□ -2.12
PCNX1-212ENST00000556516 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
PCNX1-212ENST00000556516 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
PCNX1-212ENST00000556516 MT1FP04733 61 aa1.76□□□□□ -2.13
PCNX1-212ENST00000556516 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
PCNX1-212ENST00000556516 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
PCNX1-212ENST00000556516 TNP1P09430 55 aa1.72□□□□□ -2.13
PCNX1-212ENST00000556516 C10orf95Q9H7T3 257 aa1.69□□□□□ -2.14
PCNX1-212ENST00000556516 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
PCNX1-212ENST00000556516 MT1BP07438 61 aa1.67□□□□□ -2.14
PCNX1-212ENST00000556516 MT1XP80297 61 aa1.62□□□□□ -2.15
PCNX1-212ENST00000556516 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
PCNX1-212ENST00000556516 KRTAP8-1Q8IUC2 63 aa1.56□□□□□ -2.16
PCNX1-212ENST00000556516 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
PCNX1-212ENST00000556516 USH2AO75445 5202 aa1.53□□□□□ -2.16
PCNX1-212ENST00000556516 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
PCNX1-212ENST00000556516 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
PCNX1-212ENST00000556516 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
PCNX1-212ENST00000556516 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
PCNX1-212ENST00000556516 MT1EP04732 61 aa1.43□□□□□ -2.18
PCNX1-212ENST00000556516 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
PCNX1-212ENST00000556516 MT1GP13640 62 aa1.42□□□□□ -2.18
PCNX1-212ENST00000556516 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
PCNX1-212ENST00000556516 MT1LQ93083 61 aa1.41□□□□□ -2.18
PCNX1-212ENST00000556516 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
PCNX1-212ENST00000556516 SPRR2EP22531 72 aa1.35□□□□□ -2.19
PCNX1-212ENST00000556516 SPRR2BP35325 72 aa1.35□□□□□ -2.19
PCNX1-212ENST00000556516 SPRR2AP35326 72 aa1.35□□□□□ -2.19
PCNX1-212ENST00000556516 MT1MQ8N339 61 aa1.35□□□□□ -2.19
PCNX1-212ENST00000556516 KMT2DO14686 5537 aa1.35□□□□□ -2.19
PCNX1-212ENST00000556516 INE1O15225 51 aa1.34□□□□□ -2.19
PCNX1-212ENST00000556516 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
PCNX1-212ENST00000556516 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
PCNX1-212ENST00000556516 SPRR2DP22532 72 aa1.31□□□□□ -2.2
PCNX1-212ENST00000556516 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
PCNX1-212ENST00000556516 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
PCNX1-212ENST00000556516 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
PCNX1-212ENST00000556516 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
PCNX1-212ENST00000556516 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
PCNX1-212ENST00000556516 MT1AP04731 61 aa1.22□□□□□ -2.21
PCNX1-212ENST00000556516 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
PCNX1-212ENST00000556516 KRTAP20-1Q3LI63 56 aa1.2□□□□□ -2.22
PCNX1-212ENST00000556516 NEBP20929 6669 aa1.19□□□□□ -2.22
PCNX1-212ENST00000556516 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
PCNX1-212ENST00000556516 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
PCNX1-212ENST00000556516 MT4P47944 62 aa1.12□□□□□ -2.23
PCNX1-212ENST00000556516 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.23
PCNX1-212ENST00000556516 SYNE1Q8NF91 8797 aaKnown RBP1.09□□□□□ -2.24
PCNX1-212ENST00000556516 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
PCNX1-212ENST00000556516 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
PCNX1-212ENST00000556516 PRM1P04553 51 aa0.89□□□□□ -2.27
PCNX1-212ENST00000556516 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
PCNX1-212ENST00000556516 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
PCNX1-212ENST00000556516 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
PCNX1-212ENST00000556516 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
PCNX1-212ENST00000556516 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
PCNX1-212ENST00000556516 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
PCNX1-212ENST00000556516 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
PCNX1-212ENST00000556516 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 132.2 ms