RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 TNP1P09430 55 aa1.72□□□□□ -2.13
TGFB3-205ENST00000556507 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
TGFB3-205ENST00000556507 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
TGFB3-205ENST00000556507 ABCA13Q86UQ4 5058 aa1.7□□□□□ -2.14
TGFB3-205ENST00000556507 M0R2T5 61 aa1.7□□□□□ -2.14
TGFB3-205ENST00000556507 MT1HP80294 61 aa1.69□□□□□ -2.14
TGFB3-205ENST00000556507 HERC2O95714 4834 aa1.67□□□□□ -2.14
TGFB3-205ENST00000556507 INE1O15225 51 aa1.67□□□□□ -2.14
TGFB3-205ENST00000556507 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
TGFB3-205ENST00000556507 BIRC6Q9NR09 4857 aa1.67□□□□□ -2.14
TGFB3-205ENST00000556507 MT2AP02795 61 aa1.65□□□□□ -2.15
TGFB3-205ENST00000556507 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.15
TGFB3-205ENST00000556507 HERC1Q15751 4861 aa1.64□□□□□ -2.15
TGFB3-205ENST00000556507 MT1FP04733 61 aa1.64□□□□□ -2.15
TGFB3-205ENST00000556507 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
TGFB3-205ENST00000556507 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
TGFB3-205ENST00000556507 MT1BP07438 61 aa1.6□□□□□ -2.15
TGFB3-205ENST00000556507 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
TGFB3-205ENST00000556507 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
TGFB3-205ENST00000556507 MT1XP80297 61 aa1.58□□□□□ -2.16
TGFB3-205ENST00000556507 HMCN2Q8NDA2 5059 aa1.57□□□□□ -2.16
TGFB3-205ENST00000556507 MUC2Q02817 5179 aa1.55□□□□□ -2.16
TGFB3-205ENST00000556507 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
TGFB3-205ENST00000556507 PCLOQ9Y6V0 5065 aa1.54□□□□□ -2.16
TGFB3-205ENST00000556507 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
TGFB3-205ENST00000556507 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
TGFB3-205ENST00000556507 RNF213Q63HN8 5207 aa1.48□□□□□ -2.17
TGFB3-205ENST00000556507 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
TGFB3-205ENST00000556507 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
TGFB3-205ENST00000556507 UBR4Q5T4S7 5183 aa1.42□□□□□ -2.18
TGFB3-205ENST00000556507 KRTAP19-6Q3LI70 58 aa1.4□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
TGFB3-205ENST00000556507 MT1EP04732 61 aa1.37□□□□□ -2.19
TGFB3-205ENST00000556507 MT1LQ93083 61 aa1.37□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
TGFB3-205ENST00000556507 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TGFB3-205ENST00000556507 MT1GP13640 62 aa1.32□□□□□ -2.2
TGFB3-205ENST00000556507 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
TGFB3-205ENST00000556507 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
TGFB3-205ENST00000556507 USH2AO75445 5202 aa1.28□□□□□ -2.2
TGFB3-205ENST00000556507 MT1MQ8N339 61 aa1.28□□□□□ -2.2
TGFB3-205ENST00000556507 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
TGFB3-205ENST00000556507 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
TGFB3-205ENST00000556507 KMT2DO14686 5537 aa1.22□□□□□ -2.21
TGFB3-205ENST00000556507 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
TGFB3-205ENST00000556507 MT1AP04731 61 aa1.18□□□□□ -2.22
TGFB3-205ENST00000556507 SPRR2EP22531 72 aa1.15□□□□□ -2.23
TGFB3-205ENST00000556507 SPRR2BP35325 72 aa1.15□□□□□ -2.23
TGFB3-205ENST00000556507 SPRR2AP35326 72 aa1.15□□□□□ -2.23
TGFB3-205ENST00000556507 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
TGFB3-205ENST00000556507 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
TGFB3-205ENST00000556507 SPRR2DP22532 72 aa1.1□□□□□ -2.23
TGFB3-205ENST00000556507 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.23
TGFB3-205ENST00000556507 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
TGFB3-205ENST00000556507 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
TGFB3-205ENST00000556507 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
TGFB3-205ENST00000556507 PRM1P04553 51 aa1.02□□□□□ -2.25
TGFB3-205ENST00000556507 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
TGFB3-205ENST00000556507 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
TGFB3-205ENST00000556507 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
TGFB3-205ENST00000556507 MDN1Q9NU22 5596 aa0.95□□□□□ -2.26
TGFB3-205ENST00000556507 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
TGFB3-205ENST00000556507 MT4P47944 62 aa0.94□□□□□ -2.26
TGFB3-205ENST00000556507 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
TGFB3-205ENST00000556507 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
TGFB3-205ENST00000556507 NEBP20929 6669 aa0.93□□□□□ -2.26
TGFB3-205ENST00000556507 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
TGFB3-205ENST00000556507 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
TGFB3-205ENST00000556507 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
TGFB3-205ENST00000556507 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
TGFB3-205ENST00000556507 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
TGFB3-205ENST00000556507 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
TGFB3-205ENST00000556507 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
TGFB3-205ENST00000556507 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
TGFB3-205ENST00000556507 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 66.2 ms