RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 MT1LQ93083 61 aa5.14□□□□□ -1.59
LRP1-211ENST00000556356 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
LRP1-211ENST00000556356 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
LRP1-211ENST00000556356 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
LRP1-211ENST00000556356 MT1MQ8N339 61 aa4.99□□□□□ -1.61
LRP1-211ENST00000556356 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
LRP1-211ENST00000556356 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
LRP1-211ENST00000556356 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
LRP1-211ENST00000556356 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
LRP1-211ENST00000556356 MT4P47944 62 aa4.81□□□□□ -1.64
LRP1-211ENST00000556356 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
LRP1-211ENST00000556356 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
LRP1-211ENST00000556356 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
LRP1-211ENST00000556356 MUC2Q02817 5179 aa4.75□□□□□ -1.65
LRP1-211ENST00000556356 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
LRP1-211ENST00000556356 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
LRP1-211ENST00000556356 MT3P25713 68 aa4.7□□□□□ -1.66
LRP1-211ENST00000556356 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
LRP1-211ENST00000556356 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
LRP1-211ENST00000556356 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
LRP1-211ENST00000556356 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
LRP1-211ENST00000556356 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
LRP1-211ENST00000556356 MT1AP04731 61 aa4.58□□□□□ -1.68
LRP1-211ENST00000556356 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
LRP1-211ENST00000556356 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
LRP1-211ENST00000556356 USH2AO75445 5202 aa4.49□□□□□ -1.69
LRP1-211ENST00000556356 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
LRP1-211ENST00000556356 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
LRP1-211ENST00000556356 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
LRP1-211ENST00000556356 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
LRP1-211ENST00000556356 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
LRP1-211ENST00000556356 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
LRP1-211ENST00000556356 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
LRP1-211ENST00000556356 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
LRP1-211ENST00000556356 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
LRP1-211ENST00000556356 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
LRP1-211ENST00000556356 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.73
LRP1-211ENST00000556356 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
LRP1-211ENST00000556356 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
LRP1-211ENST00000556356 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
LRP1-211ENST00000556356 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
LRP1-211ENST00000556356 PRM1P04553 51 aa4.14□□□□□ -1.75
LRP1-211ENST00000556356 NEBP20929 6669 aa4.13□□□□□ -1.75
LRP1-211ENST00000556356 KMT2DO14686 5537 aa3.98□□□□□ -1.77
LRP1-211ENST00000556356 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
LRP1-211ENST00000556356 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
LRP1-211ENST00000556356 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
LRP1-211ENST00000556356 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
LRP1-211ENST00000556356 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
LRP1-211ENST00000556356 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
LRP1-211ENST00000556356 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
LRP1-211ENST00000556356 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
LRP1-211ENST00000556356 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
LRP1-211ENST00000556356 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
LRP1-211ENST00000556356 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
LRP1-211ENST00000556356 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
LRP1-211ENST00000556356 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
LRP1-211ENST00000556356 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.89
LRP1-211ENST00000556356 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
LRP1-211ENST00000556356 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
LRP1-211ENST00000556356 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
LRP1-211ENST00000556356 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
LRP1-211ENST00000556356 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
LRP1-211ENST00000556356 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
LRP1-211ENST00000556356 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
LRP1-211ENST00000556356 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
LRP1-211ENST00000556356 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
LRP1-211ENST00000556356 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
LRP1-211ENST00000556356 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
LRP1-211ENST00000556356 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
LRP1-211ENST00000556356 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
LRP1-211ENST00000556356 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
LRP1-211ENST00000556356 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LRP1-211ENST00000556356 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
LRP1-211ENST00000556356 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
LRP1-211ENST00000556356 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
LRP1-211ENST00000556356 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
LRP1-211ENST00000556356 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms