RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 LCE5AQ5TCM9 118 aa1.21□□□□□ -2.22
SYNE2-212ENST00000554584 LCE2BO14633 110 aa1.21□□□□□ -2.22
SYNE2-212ENST00000554584 TNXBP22105 4242 aa1.21□□□□□ -2.22
SYNE2-212ENST00000554584 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
SYNE2-212ENST00000554584 FAT4Q6V0I7 4981 aa1.18□□□□□ -2.22
SYNE2-212ENST00000554584 STARD9Q9P2P6 4700 aa1.18□□□□□ -2.22
SYNE2-212ENST00000554584 HSPG2P98160 4391 aa1.18□□□□□ -2.22
SYNE2-212ENST00000554584 KRTAP12-4P60329 112 aa1.18□□□□□ -2.22
SYNE2-212ENST00000554584 LCE3DQ9BYE3 92 aa1.17□□□□□ -2.22
SYNE2-212ENST00000554584 NEBP20929 6669 aa1.16□□□□□ -2.22
SYNE2-212ENST00000554584 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.22
SYNE2-212ENST00000554584 KRTAP9-2Q9BYQ4 174 aa1.14□□□□□ -2.23
SYNE2-212ENST00000554584 LCE2AQ5TA79 106 aaPredicted RBP1.13□□□□□ -2.23
SYNE2-212ENST00000554584 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
SYNE2-212ENST00000554584 PRM1P04553 51 aa1.12□□□□□ -2.23
SYNE2-212ENST00000554584 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
SYNE2-212ENST00000554584 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
SYNE2-212ENST00000554584 KRTAP9-6A0A140TA67 174 aa1.1□□□□□ -2.23
SYNE2-212ENST00000554584 MT1BP07438 61 aa1.09□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
SYNE2-212ENST00000554584 MT1XP80297 61 aa1.07□□□□□ -2.24
SYNE2-212ENST00000554584 LPAP08519 4548 aa1.07□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP4-12Q9BQ66 201 aa1.07□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP4-2Q9BYR5 136 aa1.07□□□□□ -2.24
SYNE2-212ENST00000554584 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP9-7A8MTY7 169 aa1.04□□□□□ -2.24
SYNE2-212ENST00000554584 KMT2DO14686 5537 aa1.04□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP4-4Q9BYR3 166 aa1.04□□□□□ -2.24
SYNE2-212ENST00000554584 KRTAP4-6Q9BYQ5 205 aa1.03□□□□□ -2.24
SYNE2-212ENST00000554584 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
SYNE2-212ENST00000554584 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
SYNE2-212ENST00000554584 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
SYNE2-212ENST00000554584 MT1MQ8N339 61 aa1.01□□□□□ -2.25
SYNE2-212ENST00000554584 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
SYNE2-212ENST00000554584 KRTAP9-8Q9BYQ0 159 aa1□□□□□ -2.25
SYNE2-212ENST00000554584 KRTAP9-3Q9BYQ3 159 aa1□□□□□ -2.25
SYNE2-212ENST00000554584 MDN1Q9NU22 5596 aa1□□□□□ -2.25
SYNE2-212ENST00000554584 MUC2Q02817 5179 aa0.99□□□□□ -2.25
SYNE2-212ENST00000554584 MT1LQ93083 61 aa0.98□□□□□ -2.25
SYNE2-212ENST00000554584 MT1EP04732 61 aa0.98□□□□□ -2.25
SYNE2-212ENST00000554584 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
SYNE2-212ENST00000554584 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.96□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP4-11Q9BYQ6 195 aa0.93□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
SYNE2-212ENST00000554584 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP2-2Q9BYT5 123 aa0.92□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.26
SYNE2-212ENST00000554584 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
SYNE2-212ENST00000554584 MT1AP04731 61 aa0.89□□□□□ -2.27
SYNE2-212ENST00000554584 KRTAP9-9Q9BYP9 154 aa0.89□□□□□ -2.27
SYNE2-212ENST00000554584 KRTAP9-6A8MVA2 160 aa0.88□□□□□ -2.27
SYNE2-212ENST00000554584 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
SYNE2-212ENST00000554584 HMCN1Q96RW7 5635 aa0.85□□□□□ -2.27
SYNE2-212ENST00000554584 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
SYNE2-212ENST00000554584 KRTAP6-3Q3LI67 103 aa0.82□□□□□ -2.28
SYNE2-212ENST00000554584 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
SYNE2-212ENST00000554584 KRTAP9-4Q9BYQ2 154 aa0.8□□□□□ -2.28
SYNE2-212ENST00000554584 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
SYNE2-212ENST00000554584 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SYNE2-212ENST00000554584 KRTAP5-5Q701N2 237 aaPredicted RBP0.72□□□□□ -2.29
SYNE2-212ENST00000554584 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SYNE2-212ENST00000554584 KRTAP5-9P26371 169 aa0.69□□□□□ -2.3
SYNE2-212ENST00000554584 KRTAP5-4Q6L8H1 288 aa0.66□□□□□ -2.3
SYNE2-212ENST00000554584 KRTAP5-3Q6L8H2 238 aa0.65□□□□□ -2.31
SYNE2-212ENST00000554584 KRTAP5-8O75690 187 aa0.6□□□□□ -2.31
SYNE2-212ENST00000554584 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.57□□□□□ -2.32
SYNE2-212ENST00000554584 KRTAP5-2Q701N4 177 aa0.56□□□□□ -2.32
SYNE2-212ENST00000554584 KRTAP5-1Q6L8H4 278 aa0.55□□□□□ -2.32
SYNE2-212ENST00000554584 KRTAP5-7Q6L8G8 165 aa0.5□□□□□ -2.33
SYNE2-212ENST00000554584 KRTAP5-11Q6L8G4 156 aa0.48□□□□□ -2.33
SYNE2-212ENST00000554584 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SYNE2-212ENST00000554584 KRTAP5-10Q6L8G5 202 aa0.47□□□□□ -2.33
SYNE2-212ENST00000554584 KRTAP21-2Q3LI59 83 aa0.39□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms