RNA–Protein interactions for RNA: ENST00000552994.5

ZFC3H1-212, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 1 (best)

Gene ZFC3H1, Length 7,597 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-212ENST00000552994 PRM1P04553 51 aa3.76□□□□□ -1.81
ZFC3H1-212ENST00000552994 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
ZFC3H1-212ENST00000552994 TNXBP22105 4242 aa3.74□□□□□ -1.81
ZFC3H1-212ENST00000552994 MT1MQ8N339 61 aa3.72□□□□□ -1.81
ZFC3H1-212ENST00000552994 HERC1Q15751 4861 aa3.71□□□□□ -1.82
ZFC3H1-212ENST00000552994 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
ZFC3H1-212ENST00000552994 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
ZFC3H1-212ENST00000552994 MUC2Q02817 5179 aa3.69□□□□□ -1.82
ZFC3H1-212ENST00000552994 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
ZFC3H1-212ENST00000552994 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
ZFC3H1-212ENST00000552994 HERC2O95714 4834 aa3.63□□□□□ -1.83
ZFC3H1-212ENST00000552994 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
ZFC3H1-212ENST00000552994 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
ZFC3H1-212ENST00000552994 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
ZFC3H1-212ENST00000552994 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
ZFC3H1-212ENST00000552994 LRP2P98164 4655 aa3.57□□□□□ -1.84
ZFC3H1-212ENST00000552994 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
ZFC3H1-212ENST00000552994 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
ZFC3H1-212ENST00000552994 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
ZFC3H1-212ENST00000552994 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
ZFC3H1-212ENST00000552994 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
ZFC3H1-212ENST00000552994 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
ZFC3H1-212ENST00000552994 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
ZFC3H1-212ENST00000552994 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
ZFC3H1-212ENST00000552994 MT1AP04731 61 aa3.47□□□□□ -1.85
ZFC3H1-212ENST00000552994 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
ZFC3H1-212ENST00000552994 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
ZFC3H1-212ENST00000552994 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
ZFC3H1-212ENST00000552994 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
ZFC3H1-212ENST00000552994 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
ZFC3H1-212ENST00000552994 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
ZFC3H1-212ENST00000552994 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
ZFC3H1-212ENST00000552994 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
ZFC3H1-212ENST00000552994 USH2AO75445 5202 aa3.32□□□□□ -1.88
ZFC3H1-212ENST00000552994 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
ZFC3H1-212ENST00000552994 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
ZFC3H1-212ENST00000552994 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
ZFC3H1-212ENST00000552994 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
ZFC3H1-212ENST00000552994 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
ZFC3H1-212ENST00000552994 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
ZFC3H1-212ENST00000552994 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
ZFC3H1-212ENST00000552994 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
ZFC3H1-212ENST00000552994 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
ZFC3H1-212ENST00000552994 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
ZFC3H1-212ENST00000552994 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
ZFC3H1-212ENST00000552994 KMT2DO14686 5537 aa2.74□□□□□ -1.97
ZFC3H1-212ENST00000552994 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
ZFC3H1-212ENST00000552994 NEBP20929 6669 aa2.7□□□□□ -1.98
ZFC3H1-212ENST00000552994 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
ZFC3H1-212ENST00000552994 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
ZFC3H1-212ENST00000552994 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
ZFC3H1-212ENST00000552994 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
ZFC3H1-212ENST00000552994 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
ZFC3H1-212ENST00000552994 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
ZFC3H1-212ENST00000552994 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
ZFC3H1-212ENST00000552994 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
ZFC3H1-212ENST00000552994 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
ZFC3H1-212ENST00000552994 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
ZFC3H1-212ENST00000552994 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
ZFC3H1-212ENST00000552994 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
ZFC3H1-212ENST00000552994 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
ZFC3H1-212ENST00000552994 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
ZFC3H1-212ENST00000552994 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
ZFC3H1-212ENST00000552994 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
ZFC3H1-212ENST00000552994 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
ZFC3H1-212ENST00000552994 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
ZFC3H1-212ENST00000552994 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
ZFC3H1-212ENST00000552994 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
ZFC3H1-212ENST00000552994 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
ZFC3H1-212ENST00000552994 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
ZFC3H1-212ENST00000552994 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
ZFC3H1-212ENST00000552994 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
ZFC3H1-212ENST00000552994 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
ZFC3H1-212ENST00000552994 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
ZFC3H1-212ENST00000552994 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
ZFC3H1-212ENST00000552994 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
ZFC3H1-212ENST00000552994 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
ZFC3H1-212ENST00000552994 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms