RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
CCNT1-204ENST00000551989 MT2AP02795 61 aa2.19□□□□□ -2.06
CCNT1-204ENST00000551989 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
CCNT1-204ENST00000551989 MT1FP04733 61 aa2.17□□□□□ -2.06
CCNT1-204ENST00000551989 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
CCNT1-204ENST00000551989 HERC2O95714 4834 aa2.16□□□□□ -2.06
CCNT1-204ENST00000551989 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
CCNT1-204ENST00000551989 MT1BP07438 61 aa2.13□□□□□ -2.07
CCNT1-204ENST00000551989 MT1XP80297 61 aa2.12□□□□□ -2.07
CCNT1-204ENST00000551989 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
CCNT1-204ENST00000551989 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
CCNT1-204ENST00000551989 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
CCNT1-204ENST00000551989 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
CCNT1-204ENST00000551989 HMCN2Q8NDA2 5059 aa2.07□□□□□ -2.08
CCNT1-204ENST00000551989 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
CCNT1-204ENST00000551989 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
CCNT1-204ENST00000551989 UBR4Q5T4S7 5183 aa2.01□□□□□ -2.09
CCNT1-204ENST00000551989 MUC2Q02817 5179 aa1.99□□□□□ -2.09
CCNT1-204ENST00000551989 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
CCNT1-204ENST00000551989 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
CCNT1-204ENST00000551989 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
CCNT1-204ENST00000551989 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
CCNT1-204ENST00000551989 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
CCNT1-204ENST00000551989 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
CCNT1-204ENST00000551989 KRTAP2-3P0C7H8 128 aa1.88□□□□□ -2.11
CCNT1-204ENST00000551989 KRTAP2-4Q9BYR9 128 aa1.88□□□□□ -2.11
CCNT1-204ENST00000551989 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
CCNT1-204ENST00000551989 MT1LQ93083 61 aa1.86□□□□□ -2.11
CCNT1-204ENST00000551989 MT1EP04732 61 aa1.85□□□□□ -2.11
CCNT1-204ENST00000551989 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.11
CCNT1-204ENST00000551989 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
CCNT1-204ENST00000551989 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
CCNT1-204ENST00000551989 MT1GP13640 62 aa1.77□□□□□ -2.13
CCNT1-204ENST00000551989 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
CCNT1-204ENST00000551989 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CCNT1-204ENST00000551989 MT1MQ8N339 61 aa1.73□□□□□ -2.13
CCNT1-204ENST00000551989 USH2AO75445 5202 aa1.7□□□□□ -2.14
CCNT1-204ENST00000551989 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CCNT1-204ENST00000551989 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
CCNT1-204ENST00000551989 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
CCNT1-204ENST00000551989 MT1AP04731 61 aa1.65□□□□□ -2.15
CCNT1-204ENST00000551989 KMT2DO14686 5537 aa1.64□□□□□ -2.15
CCNT1-204ENST00000551989 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
CCNT1-204ENST00000551989 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
CCNT1-204ENST00000551989 SPRR2FQ96RM1 72 aa1.62□□□□□ -2.15
CCNT1-204ENST00000551989 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
CCNT1-204ENST00000551989 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
CCNT1-204ENST00000551989 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
CCNT1-204ENST00000551989 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
CCNT1-204ENST00000551989 SYNE2Q8WXH0 6885 aaKnown RBP1.53□□□□□ -2.17
CCNT1-204ENST00000551989 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
CCNT1-204ENST00000551989 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
CCNT1-204ENST00000551989 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
CCNT1-204ENST00000551989 SPRR2EP22531 72 aa1.48□□□□□ -2.17
CCNT1-204ENST00000551989 SPRR2BP35325 72 aa1.48□□□□□ -2.17
CCNT1-204ENST00000551989 SPRR2AP35326 72 aa1.48□□□□□ -2.17
CCNT1-204ENST00000551989 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
CCNT1-204ENST00000551989 NEBP20929 6669 aa1.47□□□□□ -2.17
CCNT1-204ENST00000551989 PRM1P04553 51 aa1.42□□□□□ -2.18
CCNT1-204ENST00000551989 SPRR2DP22532 72 aa1.42□□□□□ -2.18
CCNT1-204ENST00000551989 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
CCNT1-204ENST00000551989 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
CCNT1-204ENST00000551989 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
CCNT1-204ENST00000551989 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
CCNT1-204ENST00000551989 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
CCNT1-204ENST00000551989 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
CCNT1-204ENST00000551989 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
CCNT1-204ENST00000551989 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
CCNT1-204ENST00000551989 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
CCNT1-204ENST00000551989 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
CCNT1-204ENST00000551989 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
CCNT1-204ENST00000551989 MT4P47944 62 aa1.18□□□□□ -2.22
CCNT1-204ENST00000551989 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CCNT1-204ENST00000551989 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CCNT1-204ENST00000551989 HMCN1Q96RW7 5635 aa1.13□□□□□ -2.23
CCNT1-204ENST00000551989 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CCNT1-204ENST00000551989 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
CCNT1-204ENST00000551989 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 681.1 ms