RNA–Protein interactions for RNA: ENST00000551525.5

PTPRB-210, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-210ENST00000551525 MT1BP07438 61 aa2.23□□□□□ -2.05
PTPRB-210ENST00000551525 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
PTPRB-210ENST00000551525 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
PTPRB-210ENST00000551525 MT4P47944 62 aa2.2□□□□□ -2.06
PTPRB-210ENST00000551525 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
PTPRB-210ENST00000551525 MT1XP80297 61 aa2.19□□□□□ -2.06
PTPRB-210ENST00000551525 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
PTPRB-210ENST00000551525 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
PTPRB-210ENST00000551525 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
PTPRB-210ENST00000551525 KRTAP4-8Q9BYQ9 185 aa2.18□□□□□ -2.06
PTPRB-210ENST00000551525 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
PTPRB-210ENST00000551525 RNF213Q63HN8 5207 aa2.15□□□□□ -2.07
PTPRB-210ENST00000551525 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
PTPRB-210ENST00000551525 NEBP20929 6669 aa2.13□□□□□ -2.07
PTPRB-210ENST00000551525 MUC2Q02817 5179 aa2.13□□□□□ -2.07
PTPRB-210ENST00000551525 MUC17Q685J3 4493 aa2.13□□□□□ -2.07
PTPRB-210ENST00000551525 KRTAP19-2Q3LHN2 52 aa2.13□□□□□ -2.07
PTPRB-210ENST00000551525 LCE5AQ5TCM9 118 aa2.07□□□□□ -2.08
PTPRB-210ENST00000551525 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
PTPRB-210ENST00000551525 MT1LQ93083 61 aa2.06□□□□□ -2.08
PTPRB-210ENST00000551525 PRM1P04553 51 aa2.05□□□□□ -2.08
PTPRB-210ENST00000551525 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
PTPRB-210ENST00000551525 FAT4Q6V0I7 4981 aa2.05□□□□□ -2.08
PTPRB-210ENST00000551525 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
PTPRB-210ENST00000551525 MT1EP04732 61 aa2.04□□□□□ -2.08
PTPRB-210ENST00000551525 LCE1DQ5T752 114 aa2.04□□□□□ -2.08
PTPRB-210ENST00000551525 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
PTPRB-210ENST00000551525 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
PTPRB-210ENST00000551525 MT1MQ8N339 61 aa1.98□□□□□ -2.09
PTPRB-210ENST00000551525 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
PTPRB-210ENST00000551525 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
PTPRB-210ENST00000551525 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
PTPRB-210ENST00000551525 MT1AP04731 61 aa1.89□□□□□ -2.11
PTPRB-210ENST00000551525 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
PTPRB-210ENST00000551525 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
PTPRB-210ENST00000551525 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
PTPRB-210ENST00000551525 LCE1EQ5T753 118 aa1.84□□□□□ -2.11
PTPRB-210ENST00000551525 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
PTPRB-210ENST00000551525 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
PTPRB-210ENST00000551525 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
PTPRB-210ENST00000551525 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
PTPRB-210ENST00000551525 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
PTPRB-210ENST00000551525 USH2AO75445 5202 aa1.81□□□□□ -2.12
PTPRB-210ENST00000551525 KRTAP4-3Q9BYR4 195 aa1.8□□□□□ -2.12
PTPRB-210ENST00000551525 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
PTPRB-210ENST00000551525 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
PTPRB-210ENST00000551525 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
PTPRB-210ENST00000551525 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
PTPRB-210ENST00000551525 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
PTPRB-210ENST00000551525 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
PTPRB-210ENST00000551525 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
PTPRB-210ENST00000551525 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
PTPRB-210ENST00000551525 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.15
PTPRB-210ENST00000551525 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
PTPRB-210ENST00000551525 KMT2DO14686 5537 aa1.65□□□□□ -2.15
PTPRB-210ENST00000551525 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
PTPRB-210ENST00000551525 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
PTPRB-210ENST00000551525 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
PTPRB-210ENST00000551525 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
PTPRB-210ENST00000551525 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
PTPRB-210ENST00000551525 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
PTPRB-210ENST00000551525 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
PTPRB-210ENST00000551525 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
PTPRB-210ENST00000551525 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
PTPRB-210ENST00000551525 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
PTPRB-210ENST00000551525 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
PTPRB-210ENST00000551525 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
PTPRB-210ENST00000551525 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
PTPRB-210ENST00000551525 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
PTPRB-210ENST00000551525 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
PTPRB-210ENST00000551525 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
PTPRB-210ENST00000551525 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
PTPRB-210ENST00000551525 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
PTPRB-210ENST00000551525 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
PTPRB-210ENST00000551525 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
PTPRB-210ENST00000551525 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.02□□□□□ -2.25
PTPRB-210ENST00000551525 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 127.1 ms