RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 HERC1Q15751 4861 aa2.08□□□□□ -2.08
R3HDM2-213ENST00000551465 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
R3HDM2-213ENST00000551465 LPAP08519 4548 aa2□□□□□ -2.09
R3HDM2-213ENST00000551465 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
R3HDM2-213ENST00000551465 DNHD1Q96M86 4753 aa1.97□□□□□ -2.09
R3HDM2-213ENST00000551465 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
R3HDM2-213ENST00000551465 MT1HL1P0DM35 61 aa1.95□□□□□ -2.1
R3HDM2-213ENST00000551465 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
R3HDM2-213ENST00000551465 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
R3HDM2-213ENST00000551465 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
R3HDM2-213ENST00000551465 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
R3HDM2-213ENST00000551465 MT1XP80297 61 aa1.86□□□□□ -2.11
R3HDM2-213ENST00000551465 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
R3HDM2-213ENST00000551465 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
R3HDM2-213ENST00000551465 LRP2P98164 4655 aa1.82□□□□□ -2.12
R3HDM2-213ENST00000551465 MT1AP04731 61 aa1.81□□□□□ -2.12
R3HDM2-213ENST00000551465 MT1EP04732 61 aa1.79□□□□□ -2.12
R3HDM2-213ENST00000551465 PRM1P04553 51 aa1.76□□□□□ -2.13
R3HDM2-213ENST00000551465 MT1BP07438 61 aa1.76□□□□□ -2.13
R3HDM2-213ENST00000551465 MT1LQ93083 61 aa1.75□□□□□ -2.13
R3HDM2-213ENST00000551465 KMT2CQ8NEZ4 4911 aaKnown RBP1.75□□□□□ -2.13
R3HDM2-213ENST00000551465 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
R3HDM2-213ENST00000551465 RYR2Q92736 4967 aa1.74□□□□□ -2.13
R3HDM2-213ENST00000551465 MT2AP02795 61 aa1.7□□□□□ -2.14
R3HDM2-213ENST00000551465 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
R3HDM2-213ENST00000551465 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
R3HDM2-213ENST00000551465 MT1FP04733 61 aa1.68□□□□□ -2.14
R3HDM2-213ENST00000551465 RYR3Q15413 4870 aa1.68□□□□□ -2.14
R3HDM2-213ENST00000551465 KRTAP19-7Q3SYF9 63 aa1.65□□□□□ -2.15
R3HDM2-213ENST00000551465 RYR1P21817 5038 aa1.64□□□□□ -2.15
R3HDM2-213ENST00000551465 HERC2O95714 4834 aa1.64□□□□□ -2.15
R3HDM2-213ENST00000551465 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
R3HDM2-213ENST00000551465 SPRR2FQ96RM1 72 aa1.62□□□□□ -2.15
R3HDM2-213ENST00000551465 SPRR2AP35326 72 aa1.61□□□□□ -2.15
R3HDM2-213ENST00000551465 SPRR2BP35325 72 aa1.59□□□□□ -2.15
R3HDM2-213ENST00000551465 MT1HP80294 61 aa1.59□□□□□ -2.15
R3HDM2-213ENST00000551465 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
R3HDM2-213ENST00000551465 MUC2Q02817 5179 aa1.58□□□□□ -2.16
R3HDM2-213ENST00000551465 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
R3HDM2-213ENST00000551465 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
R3HDM2-213ENST00000551465 BIRC6Q9NR09 4857 aa1.55□□□□□ -2.16
R3HDM2-213ENST00000551465 MT1GP13640 62 aa1.53□□□□□ -2.16
R3HDM2-213ENST00000551465 SPRR2DP22532 72 aa1.52□□□□□ -2.17
R3HDM2-213ENST00000551465 SPRR2EP22531 72 aa1.5□□□□□ -2.17
R3HDM2-213ENST00000551465 UBR4Q5T4S7 5183 aa1.49□□□□□ -2.17
R3HDM2-213ENST00000551465 PCLOQ9Y6V0 5065 aa1.47□□□□□ -2.17
R3HDM2-213ENST00000551465 MT1MQ8N339 61 aa1.47□□□□□ -2.17
R3HDM2-213ENST00000551465 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
R3HDM2-213ENST00000551465 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
R3HDM2-213ENST00000551465 ABCA13Q86UQ4 5058 aa1.4□□□□□ -2.19
R3HDM2-213ENST00000551465 EPPK1P58107 5090 aaKnown RBP1.38□□□□□ -2.19
R3HDM2-213ENST00000551465 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
R3HDM2-213ENST00000551465 KIAA1109Q2LD37 5005 aa1.34□□□□□ -2.19
R3HDM2-213ENST00000551465 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
R3HDM2-213ENST00000551465 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
R3HDM2-213ENST00000551465 USH2AO75445 5202 aa1.28□□□□□ -2.2
R3HDM2-213ENST00000551465 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
R3HDM2-213ENST00000551465 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
R3HDM2-213ENST00000551465 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
R3HDM2-213ENST00000551465 KMT2DO14686 5537 aa1.17□□□□□ -2.22
R3HDM2-213ENST00000551465 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
R3HDM2-213ENST00000551465 MDN1Q9NU22 5596 aa1.09□□□□□ -2.24
R3HDM2-213ENST00000551465 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
R3HDM2-213ENST00000551465 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
R3HDM2-213ENST00000551465 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
R3HDM2-213ENST00000551465 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
R3HDM2-213ENST00000551465 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
R3HDM2-213ENST00000551465 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
R3HDM2-213ENST00000551465 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
R3HDM2-213ENST00000551465 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
R3HDM2-213ENST00000551465 FSIP2Q5CZC0 6907 aa0.78□□□□□ -2.29
R3HDM2-213ENST00000551465 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
R3HDM2-213ENST00000551465 NEBP20929 6669 aa0.66□□□□□ -2.3
R3HDM2-213ENST00000551465 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
R3HDM2-213ENST00000551465 MT4P47944 62 aa0.61□□□□□ -2.31
R3HDM2-213ENST00000551465 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
R3HDM2-213ENST00000551465 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
R3HDM2-213ENST00000551465 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 90.9 ms