RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
R3HDM2-213ENST00000551465 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
R3HDM2-213ENST00000551465 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
R3HDM2-213ENST00000551465 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
R3HDM2-213ENST00000551465 FOXD1Q16676 465 aa18.87■□□□□ 0.61
R3HDM2-213ENST00000551465 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
R3HDM2-213ENST00000551465 MSH5O43196 834 aa17.82■□□□□ 0.44
R3HDM2-213ENST00000551465 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
R3HDM2-213ENST00000551465 ADRA2BP18089 450 aa17.62■□□□□ 0.41
R3HDM2-213ENST00000551465 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
R3HDM2-213ENST00000551465 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
R3HDM2-213ENST00000551465 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
R3HDM2-213ENST00000551465 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
R3HDM2-213ENST00000551465 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
R3HDM2-213ENST00000551465 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
R3HDM2-213ENST00000551465 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
R3HDM2-213ENST00000551465 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
R3HDM2-213ENST00000551465 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
R3HDM2-213ENST00000551465 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
R3HDM2-213ENST00000551465 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
R3HDM2-213ENST00000551465 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
R3HDM2-213ENST00000551465 KCNA4P22459 653 aa15.21■□□□□ 0.03
R3HDM2-213ENST00000551465 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
R3HDM2-213ENST00000551465 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
R3HDM2-213ENST00000551465 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
R3HDM2-213ENST00000551465 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
R3HDM2-213ENST00000551465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.054e-7■■■□□ 15
R3HDM2-213ENST00000551465 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
R3HDM2-213ENST00000551465 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
R3HDM2-213ENST00000551465 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
R3HDM2-213ENST00000551465 CAPN15O75808 1086 aa14.19□□□□□ -0.14
R3HDM2-213ENST00000551465 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
R3HDM2-213ENST00000551465 APLP2Q06481 763 aa14.14□□□□□ -0.15
R3HDM2-213ENST00000551465 DSG3P32926 999 aa14.12□□□□□ -0.15
R3HDM2-213ENST00000551465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
R3HDM2-213ENST00000551465 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
R3HDM2-213ENST00000551465 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
R3HDM2-213ENST00000551465 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
R3HDM2-213ENST00000551465 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
R3HDM2-213ENST00000551465 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
R3HDM2-213ENST00000551465 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
R3HDM2-213ENST00000551465 ZBTB22O15209 634 aa13.95□□□□□ -0.18
R3HDM2-213ENST00000551465 ABCB7O75027 752 aa13.86□□□□□ -0.19
R3HDM2-213ENST00000551465 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
R3HDM2-213ENST00000551465 POTEHQ6S545 545 aa13.69□□□□□ -0.22
R3HDM2-213ENST00000551465 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
R3HDM2-213ENST00000551465 POLA2Q14181 598 aa13.66□□□□□ -0.22
R3HDM2-213ENST00000551465 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
R3HDM2-213ENST00000551465 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
R3HDM2-213ENST00000551465 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
R3HDM2-213ENST00000551465 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
R3HDM2-213ENST00000551465 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
R3HDM2-213ENST00000551465 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
R3HDM2-213ENST00000551465 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
R3HDM2-213ENST00000551465 FBLN2P98095 1184 aa13.18□□□□□ -0.3
R3HDM2-213ENST00000551465 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
R3HDM2-213ENST00000551465 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
R3HDM2-213ENST00000551465 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
R3HDM2-213ENST00000551465 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
R3HDM2-213ENST00000551465 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
R3HDM2-213ENST00000551465 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
R3HDM2-213ENST00000551465 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
R3HDM2-213ENST00000551465 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
R3HDM2-213ENST00000551465 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
R3HDM2-213ENST00000551465 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
R3HDM2-213ENST00000551465 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
R3HDM2-213ENST00000551465 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
R3HDM2-213ENST00000551465 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
R3HDM2-213ENST00000551465 HAX1O00165 279 aa12.7□□□□□ -0.38
R3HDM2-213ENST00000551465 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
R3HDM2-213ENST00000551465 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
R3HDM2-213ENST00000551465 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
R3HDM2-213ENST00000551465 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
R3HDM2-213ENST00000551465 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
R3HDM2-213ENST00000551465 EVX2Q03828 476 aa12.42□□□□□ -0.42
R3HDM2-213ENST00000551465 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
R3HDM2-213ENST00000551465 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
R3HDM2-213ENST00000551465 FKBP8Q14318 412 aa12.38□□□□□ -0.43
R3HDM2-213ENST00000551465 PROM2Q8N271 834 aa12.25□□□□□ -0.45
R3HDM2-213ENST00000551465 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
R3HDM2-213ENST00000551465 GABBR2O75899 941 aa12.23□□□□□ -0.45
R3HDM2-213ENST00000551465 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
R3HDM2-213ENST00000551465 CLCN6P51797 869 aa12.18□□□□□ -0.46
R3HDM2-213ENST00000551465 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
R3HDM2-213ENST00000551465 MIER1Q8N108 512 aa12.11□□□□□ -0.47
R3HDM2-213ENST00000551465 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
R3HDM2-213ENST00000551465 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
R3HDM2-213ENST00000551465 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
R3HDM2-213ENST00000551465 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
R3HDM2-213ENST00000551465 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
R3HDM2-213ENST00000551465 LHX8Q68G74 356 aa12□□□□□ -0.49
R3HDM2-213ENST00000551465 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
R3HDM2-213ENST00000551465 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
R3HDM2-213ENST00000551465 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
R3HDM2-213ENST00000551465 DCBLD2Q96PD2 775 aa11.93□□□□□ -0.5
R3HDM2-213ENST00000551465 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
R3HDM2-213ENST00000551465 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
R3HDM2-213ENST00000551465 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
R3HDM2-213ENST00000551465 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
R3HDM2-213ENST00000551465 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms