RNA–Protein interactions for RNA: ENST00000550590.5

PMEL-216, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-216ENST00000550590 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
PMEL-216ENST00000550590 PCLOQ9Y6V0 5065 aa2.29□□□□□ -2.04
PMEL-216ENST00000550590 RYR1P21817 5038 aa2.25□□□□□ -2.05
PMEL-216ENST00000550590 HERC1Q15751 4861 aa2.24□□□□□ -2.05
PMEL-216ENST00000550590 HERC2O95714 4834 aa2.23□□□□□ -2.05
PMEL-216ENST00000550590 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
PMEL-216ENST00000550590 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
PMEL-216ENST00000550590 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
PMEL-216ENST00000550590 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
PMEL-216ENST00000550590 M0R2T5 61 aa2.19□□□□□ -2.06
PMEL-216ENST00000550590 ABCA13Q86UQ4 5058 aa2.17□□□□□ -2.06
PMEL-216ENST00000550590 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
PMEL-216ENST00000550590 MT1XP80297 61 aa2.13□□□□□ -2.07
PMEL-216ENST00000550590 LRP2P98164 4655 aa2.12□□□□□ -2.07
PMEL-216ENST00000550590 LPAP08519 4548 aa2.12□□□□□ -2.07
PMEL-216ENST00000550590 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
PMEL-216ENST00000550590 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
PMEL-216ENST00000550590 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
PMEL-216ENST00000550590 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
PMEL-216ENST00000550590 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
PMEL-216ENST00000550590 MT1BP07438 61 aa2.05□□□□□ -2.08
PMEL-216ENST00000550590 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
PMEL-216ENST00000550590 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
PMEL-216ENST00000550590 MT2AP02795 61 aa2.01□□□□□ -2.09
PMEL-216ENST00000550590 MT1FP04733 61 aa2□□□□□ -2.09
PMEL-216ENST00000550590 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
PMEL-216ENST00000550590 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
PMEL-216ENST00000550590 MT1EP04732 61 aa1.94□□□□□ -2.1
PMEL-216ENST00000550590 MT1HP80294 61 aa1.93□□□□□ -2.1
PMEL-216ENST00000550590 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
PMEL-216ENST00000550590 MT1LQ93083 61 aa1.91□□□□□ -2.1
PMEL-216ENST00000550590 MT1AP04731 61 aa1.9□□□□□ -2.11
PMEL-216ENST00000550590 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
PMEL-216ENST00000550590 MUC2Q02817 5179 aa1.85□□□□□ -2.11
PMEL-216ENST00000550590 PRM1P04553 51 aa1.82□□□□□ -2.12
PMEL-216ENST00000550590 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
PMEL-216ENST00000550590 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
PMEL-216ENST00000550590 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
PMEL-216ENST00000550590 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
PMEL-216ENST00000550590 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
PMEL-216ENST00000550590 MT1GP13640 62 aa1.7□□□□□ -2.14
PMEL-216ENST00000550590 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
PMEL-216ENST00000550590 FSIP2Q5CZC0 6907 aa1.69□□□□□ -2.14
PMEL-216ENST00000550590 MT1MQ8N339 61 aa1.68□□□□□ -2.14
PMEL-216ENST00000550590 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
PMEL-216ENST00000550590 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
PMEL-216ENST00000550590 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
PMEL-216ENST00000550590 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
PMEL-216ENST00000550590 SPRR2AP35326 72 aa1.64□□□□□ -2.15
PMEL-216ENST00000550590 USH2AO75445 5202 aa1.62□□□□□ -2.15
PMEL-216ENST00000550590 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.15
PMEL-216ENST00000550590 SPRR2BP35325 72 aa1.59□□□□□ -2.15
PMEL-216ENST00000550590 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
PMEL-216ENST00000550590 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
PMEL-216ENST00000550590 SPRR2EP22531 72 aa1.55□□□□□ -2.16
PMEL-216ENST00000550590 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
PMEL-216ENST00000550590 SPRR2DP22532 72 aa1.53□□□□□ -2.16
PMEL-216ENST00000550590 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
PMEL-216ENST00000550590 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
PMEL-216ENST00000550590 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
PMEL-216ENST00000550590 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
PMEL-216ENST00000550590 MUC12Q9UKN1 5478 aa1.48□□□□□ -2.17
PMEL-216ENST00000550590 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
PMEL-216ENST00000550590 KMT2DO14686 5537 aa1.42□□□□□ -2.18
PMEL-216ENST00000550590 NEBP20929 6669 aa1.42□□□□□ -2.18
PMEL-216ENST00000550590 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
PMEL-216ENST00000550590 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
PMEL-216ENST00000550590 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
PMEL-216ENST00000550590 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
PMEL-216ENST00000550590 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
PMEL-216ENST00000550590 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
PMEL-216ENST00000550590 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
PMEL-216ENST00000550590 MT4P47944 62 aa1.06□□□□□ -2.24
PMEL-216ENST00000550590 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
PMEL-216ENST00000550590 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
PMEL-216ENST00000550590 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
PMEL-216ENST00000550590 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
PMEL-216ENST00000550590 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 35 ms